Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 AC026748.1-201ENST00000624349 3251 ntBASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 POM121L8P-201ENST00000417732 1281 ntBASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 POM121L9P-203ENST00000441984 1285 ntBASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 HIST2H2BB-201ENST00000449108 381 ntBASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 AC234782.1-201ENST00000451950 919 ntBASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CTC1Q2NKJ3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 AL645937.2-201ENST00000396808 931 ntBASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 AC013355.1-201ENST00000562625 723 ntBASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 BNIP3P13-201ENST00000599968 566 ntBASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 OR10B1P-201ENST00000601666 907 ntBASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTC1Q2NKJ3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 KRT8P4-201ENST00000509735 1454 ntBASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms