Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 SPTLC1P1-201ENST00000447199 261 ntBASIC15.31■□□□□ 0.04
PRAMEP78395 TSPY16P-201ENST00000449843 468 ntBASIC15.31■□□□□ 0.04
PRAMEP78395 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PRAMEP78395 SERBP1P5-201ENST00000510079 1181 ntBASIC15.31■□□□□ 0.04
PRAMEP78395 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.31■□□□□ 0.04
PRAMEP78395 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.31■□□□□ 0.04
PRAMEP78395 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.31■□□□□ 0.04
PRAMEP78395 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.31■□□□□ 0.04
PRAMEP78395 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.31■□□□□ 0.04
PRAMEP78395 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.31■□□□□ 0.04
PRAMEP78395 AC093813.1-201ENST00000605066 256 ntBASIC15.31■□□□□ 0.04
PRAMEP78395 AC093726.1-201ENST00000608064 963 ntBASIC15.31■□□□□ 0.04
PRAMEP78395 AL662799.1-202ENST00000614205 422 ntBASIC15.31■□□□□ 0.04
PRAMEP78395 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.31■□□□□ 0.04
PRAMEP78395 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.31■□□□□ 0.04
PRAMEP78395 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEP78395 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEP78395 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEP78395 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEP78395 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.31■□□□□ 0.04
PRAMEP78395 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEP78395 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.31■□□□□ 0.04
PRAMEP78395 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PRAMEP78395 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEP78395 INTS4P2-202ENST00000614726 2019 ntBASIC15.31■□□□□ 0.04
PRAMEP78395 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEP78395 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEP78395 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PRAMEP78395 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEP78395 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEP78395 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PRAMEP78395 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEP78395 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEP78395 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEP78395 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEP78395 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.31■□□□□ 0.04
PRAMEP78395 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.31■□□□□ 0.04
PRAMEP78395 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEP78395 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.3■□□□□ 0.04
PRAMEP78395 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PRAMEP78395 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEP78395 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.3■□□□□ 0.04
PRAMEP78395 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEP78395 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEP78395 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEP78395 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEP78395 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEP78395 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEP78395 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEP78395 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEP78395 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEP78395 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEP78395 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEP78395 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PRAMEP78395 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PRAMEP78395 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEP78395 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEP78395 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEP78395 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEP78395 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PRAMEP78395 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PRAMEP78395 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEP78395 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.3■□□□□ 0.04
PRAMEP78395 AC134915.1-201ENST00000426461 574 ntBASIC15.3■□□□□ 0.04
PRAMEP78395 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.3■□□□□ 0.04
PRAMEP78395 DFFBP1-201ENST00000433250 979 ntBASIC15.3■□□□□ 0.04
PRAMEP78395 AL353779.1-201ENST00000434793 351 ntBASIC15.3■□□□□ 0.04
PRAMEP78395 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.3■□□□□ 0.04
PRAMEP78395 LILRP1-201ENST00000444199 1370 ntBASIC15.3■□□□□ 0.04
PRAMEP78395 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEP78395 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEP78395 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.3■□□□□ 0.04
PRAMEP78395 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.3■□□□□ 0.04
PRAMEP78395 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.3■□□□□ 0.04
PRAMEP78395 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.3■□□□□ 0.04
PRAMEP78395 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.3■□□□□ 0.04
PRAMEP78395 AC007292.2-201ENST00000593524 1812 ntBASIC15.3■□□□□ 0.04
PRAMEP78395 BRI3BPP1-201ENST00000594224 787 ntBASIC15.3■□□□□ 0.04
PRAMEP78395 AL360270.3-201ENST00000609118 1348 ntBASIC15.3■□□□□ 0.04
PRAMEP78395 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PRAMEP78395 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.3■□□□□ 0.04
PRAMEP78395 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEP78395 INTS4P1-203ENST00000641008 3683 ntBASIC15.3■□□□□ 0.04
PRAMEP78395 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEP78395 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEP78395 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PRAMEP78395 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PRAMEP78395 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEP78395 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.3■□□□□ 0.04
PRAMEP78395 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEP78395 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEP78395 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PRAMEP78395 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEP78395 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEP78395 AL157414.3-201ENST00000624276 1954 ntBASIC15.29■□□□□ 0.04
PRAMEP78395 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEP78395 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.29■□□□□ 0.04
PRAMEP78395 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PRAMEP78395 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEP78395 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms