Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HIST1H3AP68431 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.22□□□□□ -0.29
HIST1H3AP68431 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H3AP68431 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
HIST1H3AP68431 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H3AP68431 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H3AP68431 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H3AP68431 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H3AP68431 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H3AP68431 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.22□□□□□ -0.29
HIST1H3AP68431 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H3AP68431 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H3AP68431 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H3AP68431 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H3AP68431 AC113367.3-201ENST00000508316 1912 ntBASIC13.21□□□□□ -0.29
HIST1H3AP68431 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H3AP68431 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H3AP68431 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H3AP68431 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H3AP68431 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
HIST1H3AP68431 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.21□□□□□ -0.29
HIST1H3AP68431 AC007191.1-201ENST00000623179 2995 ntBASIC13.21□□□□□ -0.29
HIST1H3AP68431 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H3AP68431 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
HIST1H3AP68431 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
HIST1H3AP68431 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H3AP68431 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H3AP68431 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H3AP68431 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.21□□□□□ -0.29
HIST1H3AP68431 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H3AP68431 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H3AP68431 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
HIST1H3AP68431 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.21□□□□□ -0.29
HIST1H3AP68431 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.21□□□□□ -0.29
HIST1H3AP68431 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H3AP68431 AC026434.2-201ENST00000506094 1078 ntBASIC13.21□□□□□ -0.29
HIST1H3AP68431 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.21□□□□□ -0.29
HIST1H3AP68431 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.21□□□□□ -0.29
HIST1H3AP68431 AC190387.1-201ENST00000551683 408 ntBASIC13.21□□□□□ -0.29
HIST1H3AP68431 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.21□□□□□ -0.29
HIST1H3AP68431 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.21□□□□□ -0.29
HIST1H3AP68431 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.21□□□□□ -0.29
HIST1H3AP68431 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
HIST1H3AP68431 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
HIST1H3AP68431 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H3AP68431 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.21□□□□□ -0.29
HIST1H3AP68431 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H3AP68431 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
HIST1H3AP68431 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.21□□□□□ -0.29
HIST1H3AP68431 AL009178.2-201ENST00000597278 2719 ntBASIC13.21□□□□□ -0.29
HIST1H3AP68431 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST1H3AP68431 OR2I1P-209ENST00000641730 5365 ntBASIC13.21□□□□□ -0.3
HIST1H3AP68431 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.21□□□□□ -0.3
HIST1H3AP68431 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HIST1H3AP68431 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
HIST1H3AP68431 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.21□□□□□ -0.3
HIST1H3AP68431 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HIST1H3AP68431 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.21□□□□□ -0.3
HIST1H3AP68431 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.21□□□□□ -0.3
HIST1H3AP68431 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
HIST1H3AP68431 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
HIST1H3AP68431 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST1H3AP68431 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST1H3AP68431 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST1H3AP68431 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST1H3AP68431 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.2□□□□□ -0.3
HIST1H3AP68431 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST1H3AP68431 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST1H3AP68431 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HIST1H3AP68431 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST1H3AP68431 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST1H3AP68431 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.2□□□□□ -0.3
HIST1H3AP68431 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST1H3AP68431 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HIST1H3AP68431 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST1H3AP68431 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST1H3AP68431 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.2□□□□□ -0.3
HIST1H3AP68431 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HIST1H3AP68431 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
HIST1H3AP68431 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.2□□□□□ -0.3
HIST1H3AP68431 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.2□□□□□ -0.3
HIST1H3AP68431 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.2□□□□□ -0.3
HIST1H3AP68431 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.2□□□□□ -0.3
HIST1H3AP68431 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HIST1H3AP68431 AC022137.2-201ENST00000503482 481 ntBASIC13.2□□□□□ -0.3
HIST1H3AP68431 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.2□□□□□ -0.3
HIST1H3AP68431 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.2□□□□□ -0.3
HIST1H3AP68431 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.2□□□□□ -0.3
HIST1H3AP68431 WASH4P-201ENST00000564273 1246 ntBASIC13.2□□□□□ -0.3
HIST1H3AP68431 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
HIST1H3AP68431 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.2□□□□□ -0.3
HIST1H3AP68431 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.2□□□□□ -0.3
HIST1H3AP68431 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
HIST1H3AP68431 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.2□□□□□ -0.3
HIST1H3AP68431 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.2□□□□□ -0.3
HIST1H3AP68431 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST1H3AP68431 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.2□□□□□ -0.3
HIST1H3AP68431 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST1H3AP68431 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
HIST1H3AP68431 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms