Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.81□□□□□ -0.2
CXCR4P61073 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.81□□□□□ -0.2
CXCR4P61073 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCR4P61073 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCR4P61073 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.81□□□□□ -0.2
CXCR4P61073 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CXCR4P61073 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CXCR4P61073 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CXCR4P61073 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
CXCR4P61073 AC023794.5-201ENST00000564380 2157 ntBASIC13.81□□□□□ -0.2
CXCR4P61073 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CXCR4P61073 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CXCR4P61073 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.8□□□□□ -0.2
CXCR4P61073 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CXCR4P61073 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CXCR4P61073 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCR4P61073 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCR4P61073 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCR4P61073 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CXCR4P61073 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.8□□□□□ -0.2
CXCR4P61073 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CXCR4P61073 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCR4P61073 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.8□□□□□ -0.2
CXCR4P61073 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.8□□□□□ -0.2
CXCR4P61073 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CXCR4P61073 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
CXCR4P61073 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCR4P61073 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCR4P61073 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.8□□□□□ -0.2
CXCR4P61073 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CXCR4P61073 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.8□□□□□ -0.2
CXCR4P61073 MIR940-201ENST00000401276 94 ntBASIC13.8□□□□□ -0.2
CXCR4P61073 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CXCR4P61073 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.8□□□□□ -0.2
CXCR4P61073 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.8□□□□□ -0.2
CXCR4P61073 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.8□□□□□ -0.2
CXCR4P61073 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.8□□□□□ -0.2
CXCR4P61073 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CXCR4P61073 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCR4P61073 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CXCR4P61073 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.8□□□□□ -0.2
CXCR4P61073 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.8□□□□□ -0.2
CXCR4P61073 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CXCR4P61073 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.8□□□□□ -0.2
CXCR4P61073 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCR4P61073 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCR4P61073 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CXCR4P61073 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCR4P61073 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCR4P61073 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCR4P61073 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCR4P61073 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CXCR4P61073 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
CXCR4P61073 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCR4P61073 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CXCR4P61073 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCR4P61073 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCR4P61073 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCR4P61073 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCR4P61073 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCR4P61073 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCR4P61073 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCR4P61073 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.79□□□□□ -0.2
CXCR4P61073 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCR4P61073 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCR4P61073 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.79□□□□□ -0.2
CXCR4P61073 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CXCR4P61073 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CXCR4P61073 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCR4P61073 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCR4P61073 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.79□□□□□ -0.2
CXCR4P61073 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCR4P61073 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.79□□□□□ -0.2
CXCR4P61073 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCR4P61073 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.79□□□□□ -0.2
CXCR4P61073 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CXCR4P61073 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCR4P61073 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
CXCR4P61073 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCR4P61073 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CXCR4P61073 TARDBPP1-201ENST00000442013 1203 ntBASIC13.79□□□□□ -0.2
CXCR4P61073 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.79□□□□□ -0.2
CXCR4P61073 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.79□□□□□ -0.2
CXCR4P61073 ALG1L8P-201ENST00000533887 760 ntBASIC13.79□□□□□ -0.2
CXCR4P61073 BANF1P1-201ENST00000553684 263 ntBASIC13.79□□□□□ -0.2
CXCR4P61073 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.79□□□□□ -0.2
CXCR4P61073 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
CXCR4P61073 AC074044.1-201ENST00000609673 707 ntBASIC13.79□□□□□ -0.2
CXCR4P61073 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.79□□□□□ -0.2
CXCR4P61073 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCR4P61073 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CXCR4P61073 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.79□□□□□ -0.2
CXCR4P61073 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CXCR4P61073 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CXCR4P61073 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CXCR4P61073 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.79□□□□□ -0.2
CXCR4P61073 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CXCR4P61073 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CXCR4P61073 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CXCR4P61073 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms