Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VCPP55072 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.23■□□□□ 0.19
VCPP55072 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VCPP55072 FAM45BP-202ENST00000592932 1624 ntBASIC16.23■□□□□ 0.19
VCPP55072 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VCPP55072 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VCPP55072 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
VCPP55072 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VCPP55072 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
VCPP55072 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
VCPP55072 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.22■□□□□ 0.19
VCPP55072 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.22■□□□□ 0.19
VCPP55072 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
VCPP55072 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VCPP55072 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
VCPP55072 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.22■□□□□ 0.19
VCPP55072 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VCPP55072 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
VCPP55072 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.22■□□□□ 0.19
VCPP55072 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VCPP55072 MIR33B-201ENST00000385104 96 ntBASIC16.22■□□□□ 0.19
VCPP55072 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.22■□□□□ 0.19
VCPP55072 SOCS2P1-201ENST00000417727 557 ntBASIC16.22■□□□□ 0.19
VCPP55072 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.22■□□□□ 0.19
VCPP55072 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VCPP55072 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.22■□□□□ 0.19
VCPP55072 AC012441.1-201ENST00000446669 685 ntBASIC16.22■□□□□ 0.19
VCPP55072 AL591846.1-201ENST00000451736 433 ntBASIC16.22■□□□□ 0.19
VCPP55072 BX284668.4-201ENST00000453917 508 ntBASIC16.22■□□□□ 0.19
VCPP55072 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.22■□□□□ 0.19
VCPP55072 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
VCPP55072 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.22■□□□□ 0.19
VCPP55072 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.22■□□□□ 0.19
VCPP55072 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.22■□□□□ 0.19
VCPP55072 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
VCPP55072 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VCPP55072 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VCPP55072 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
VCPP55072 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VCPP55072 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VCPP55072 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VCPP55072 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VCPP55072 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.22■□□□□ 0.19
VCPP55072 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
VCPP55072 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VCPP55072 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
VCPP55072 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
VCPP55072 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.22■□□□□ 0.19
VCPP55072 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.22■□□□□ 0.19
VCPP55072 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.21■□□□□ 0.19
VCPP55072 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.21■□□□□ 0.19
VCPP55072 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
VCPP55072 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.21■□□□□ 0.19
VCPP55072 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.21■□□□□ 0.19
VCPP55072 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VCPP55072 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.21■□□□□ 0.19
VCPP55072 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VCPP55072 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VCPP55072 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VCPP55072 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.21■□□□□ 0.19
VCPP55072 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
VCPP55072 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.21■□□□□ 0.19
VCPP55072 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
VCPP55072 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VCPP55072 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
VCPP55072 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.21■□□□□ 0.19
VCPP55072 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VCPP55072 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
VCPP55072 TOMM22P5-201ENST00000416399 439 ntBASIC16.21■□□□□ 0.19
VCPP55072 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VCPP55072 AC134915.1-201ENST00000426461 574 ntBASIC16.21■□□□□ 0.19
VCPP55072 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.21■□□□□ 0.19
VCPP55072 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.21■□□□□ 0.19
VCPP55072 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VCPP55072 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.21■□□□□ 0.19
VCPP55072 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.21■□□□□ 0.19
VCPP55072 RN7SL769P-201ENST00000469386 295 ntBASIC16.21■□□□□ 0.19
VCPP55072 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.21■□□□□ 0.19
VCPP55072 AC091804.1-201ENST00000486888 567 ntBASIC16.21■□□□□ 0.19
VCPP55072 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.21■□□□□ 0.19
VCPP55072 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.21■□□□□ 0.19
VCPP55072 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.21■□□□□ 0.19
VCPP55072 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.21■□□□□ 0.19
VCPP55072 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VCPP55072 AC020914.3-201ENST00000594712 304 ntBASIC16.21■□□□□ 0.19
VCPP55072 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.21■□□□□ 0.19
VCPP55072 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.21■□□□□ 0.19
VCPP55072 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.21■□□□□ 0.19
VCPP55072 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.21■□□□□ 0.19
VCPP55072 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
VCPP55072 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VCPP55072 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VCPP55072 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VCPP55072 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VCPP55072 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VCPP55072 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
VCPP55072 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VCPP55072 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VCPP55072 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
VCPP55072 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms