Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.68■□□□□ 0.1
EPHB3P54753 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.68■□□□□ 0.1
EPHB3P54753 CYP46A4P-201ENST00000414953 267 ntBASIC15.68■□□□□ 0.1
EPHB3P54753 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC15.68■□□□□ 0.1
EPHB3P54753 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC15.68■□□□□ 0.1
EPHB3P54753 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
EPHB3P54753 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.68■□□□□ 0.1
EPHB3P54753 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.68■□□□□ 0.1
EPHB3P54753 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
EPHB3P54753 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.68■□□□□ 0.1
EPHB3P54753 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
EPHB3P54753 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.68■□□□□ 0.1
EPHB3P54753 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.68■□□□□ 0.1
EPHB3P54753 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHB3P54753 AL136295.7-201ENST00000619226 1200 ntBASIC15.68■□□□□ 0.1
EPHB3P54753 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHB3P54753 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHB3P54753 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
EPHB3P54753 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.68■□□□□ 0.1
EPHB3P54753 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
EPHB3P54753 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHB3P54753 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
EPHB3P54753 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHB3P54753 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHB3P54753 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.68■□□□□ 0.1
EPHB3P54753 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHB3P54753 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.68■□□□□ 0.1
EPHB3P54753 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHB3P54753 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHB3P54753 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHB3P54753 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHB3P54753 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHB3P54753 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHB3P54753 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHB3P54753 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHB3P54753 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
EPHB3P54753 TUBBP5-203ENST00000508529 1334 ntBASIC15.68■□□□□ 0.1
EPHB3P54753 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
EPHB3P54753 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.67■□□□□ 0.1
EPHB3P54753 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
EPHB3P54753 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
EPHB3P54753 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
EPHB3P54753 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
EPHB3P54753 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
EPHB3P54753 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
EPHB3P54753 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
EPHB3P54753 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
EPHB3P54753 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.67■□□□□ 0.1
EPHB3P54753 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
EPHB3P54753 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.67■□□□□ 0.1
EPHB3P54753 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.67■□□□□ 0.1
EPHB3P54753 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
EPHB3P54753 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
EPHB3P54753 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
EPHB3P54753 AC104073.2-201ENST00000453737 312 ntBASIC15.67■□□□□ 0.1
EPHB3P54753 AC022217.1-201ENST00000521069 738 ntBASIC15.67■□□□□ 0.1
EPHB3P54753 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.67■□□□□ 0.1
EPHB3P54753 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
EPHB3P54753 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.67■□□□□ 0.1
EPHB3P54753 RHOQP1-201ENST00000555758 579 ntBASIC15.67■□□□□ 0.1
EPHB3P54753 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.67■□□□□ 0.1
EPHB3P54753 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.67■□□□□ 0.1
EPHB3P54753 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.67■□□□□ 0.1
EPHB3P54753 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.67■□□□□ 0.1
EPHB3P54753 AC005324.6-201ENST00000587972 613 ntBASIC15.67■□□□□ 0.1
EPHB3P54753 AC100757.4-201ENST00000626934 759 ntBASIC15.67■□□□□ 0.1
EPHB3P54753 AC138627.1-207ENST00000641560 1006 ntBASIC15.67■□□□□ 0.1
EPHB3P54753 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
EPHB3P54753 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
EPHB3P54753 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
EPHB3P54753 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
EPHB3P54753 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
EPHB3P54753 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.67■□□□□ 0.1
EPHB3P54753 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
EPHB3P54753 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
EPHB3P54753 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
EPHB3P54753 E2F3P2-201ENST00000447755 1422 ntBASIC15.67■□□□□ 0.1
EPHB3P54753 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
EPHB3P54753 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.67■□□□□ 0.1
EPHB3P54753 SALL4P5-201ENST00000419001 1760 ntBASIC15.67■□□□□ 0.1
EPHB3P54753 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
EPHB3P54753 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
EPHB3P54753 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
EPHB3P54753 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.66■□□□□ 0.1
EPHB3P54753 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
EPHB3P54753 AC003102.2-201ENST00000589195 1469 ntBASIC15.66■□□□□ 0.1
EPHB3P54753 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
EPHB3P54753 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
EPHB3P54753 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.66■□□□□ 0.1
EPHB3P54753 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
EPHB3P54753 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EPHB3P54753 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
EPHB3P54753 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.66■□□□□ 0.1
EPHB3P54753 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EPHB3P54753 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.66■□□□□ 0.1
EPHB3P54753 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EPHB3P54753 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.66■□□□□ 0.1
EPHB3P54753 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.66■□□□□ 0.1
EPHB3P54753 Z97180.1-201ENST00000445173 988 ntBASIC15.66■□□□□ 0.1
EPHB3P54753 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms