Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNA3P52797 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNA3P52797 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNA3P52797 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNA3P52797 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.13□□□□□ -0.15
EFNA3P52797 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNA3P52797 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
EFNA3P52797 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNA3P52797 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNA3P52797 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.13□□□□□ -0.15
EFNA3P52797 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
EFNA3P52797 ACE3P-201ENST00000423435 1973 ntBASIC14.13□□□□□ -0.15
EFNA3P52797 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNA3P52797 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNA3P52797 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNA3P52797 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNA3P52797 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNA3P52797 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNA3P52797 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.12□□□□□ -0.15
EFNA3P52797 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
EFNA3P52797 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.12□□□□□ -0.15
EFNA3P52797 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNA3P52797 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNA3P52797 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNA3P52797 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNA3P52797 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.12□□□□□ -0.15
EFNA3P52797 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.12□□□□□ -0.15
EFNA3P52797 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EFNA3P52797 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNA3P52797 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
EFNA3P52797 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EFNA3P52797 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNA3P52797 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNA3P52797 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNA3P52797 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
EFNA3P52797 MIR326-201ENST00000362220 95 ntBASIC14.12□□□□□ -0.15
EFNA3P52797 RN7SKP230-201ENST00000365642 335 ntBASIC14.12□□□□□ -0.15
EFNA3P52797 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.12□□□□□ -0.15
EFNA3P52797 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EFNA3P52797 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EFNA3P52797 FAM8A4P-201ENST00000435433 1213 ntBASIC14.12□□□□□ -0.15
EFNA3P52797 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.12□□□□□ -0.15
EFNA3P52797 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EFNA3P52797 ZNF767P-206ENST00000513792 565 ntBASIC14.12□□□□□ -0.15
EFNA3P52797 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EFNA3P52797 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.12□□□□□ -0.15
EFNA3P52797 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.12□□□□□ -0.15
EFNA3P52797 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.12□□□□□ -0.15
EFNA3P52797 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
EFNA3P52797 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNA3P52797 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
EFNA3P52797 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNA3P52797 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.12□□□□□ -0.15
EFNA3P52797 AL603764.1-201ENST00000636452 321 ntBASIC14.12□□□□□ -0.15
EFNA3P52797 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
EFNA3P52797 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNA3P52797 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.12□□□□□ -0.15
EFNA3P52797 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.12□□□□□ -0.15
EFNA3P52797 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNA3P52797 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNA3P52797 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EFNA3P52797 AC020910.5-201ENST00000623668 1865 ntBASIC14.12□□□□□ -0.15
EFNA3P52797 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNA3P52797 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
EFNA3P52797 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNA3P52797 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNA3P52797 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.12□□□□□ -0.15
EFNA3P52797 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
EFNA3P52797 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EFNA3P52797 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
EFNA3P52797 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EFNA3P52797 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EFNA3P52797 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.12□□□□□ -0.15
EFNA3P52797 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNA3P52797 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.12□□□□□ -0.15
EFNA3P52797 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.11□□□□□ -0.15
EFNA3P52797 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
EFNA3P52797 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
EFNA3P52797 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
EFNA3P52797 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
EFNA3P52797 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
EFNA3P52797 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.11□□□□□ -0.15
EFNA3P52797 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.11□□□□□ -0.15
EFNA3P52797 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
EFNA3P52797 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
EFNA3P52797 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
EFNA3P52797 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.11□□□□□ -0.15
EFNA3P52797 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
EFNA3P52797 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
EFNA3P52797 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
EFNA3P52797 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
EFNA3P52797 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
EFNA3P52797 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
EFNA3P52797 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
EFNA3P52797 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
EFNA3P52797 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.11□□□□□ -0.15
EFNA3P52797 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.11□□□□□ -0.15
EFNA3P52797 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.11□□□□□ -0.15
EFNA3P52797 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
EFNA3P52797 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms