Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CCR9P51686 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCR9P51686 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCR9P51686 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCR9P51686 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCR9P51686 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.37□□□□□ -0.27
CCR9P51686 AP001267.2-201ENST00000532619 2086 ntBASIC13.36□□□□□ -0.27
CCR9P51686 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCR9P51686 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
CCR9P51686 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CCR9P51686 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCR9P51686 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCR9P51686 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.36□□□□□ -0.27
CCR9P51686 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCR9P51686 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCR9P51686 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CCR9P51686 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCR9P51686 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCR9P51686 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCR9P51686 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCR9P51686 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCR9P51686 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCR9P51686 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCR9P51686 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCR9P51686 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCR9P51686 AL022342.1-201ENST00000400363 863 ntBASIC13.36□□□□□ -0.27
CCR9P51686 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.36□□□□□ -0.27
CCR9P51686 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCR9P51686 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.36□□□□□ -0.27
CCR9P51686 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.36□□□□□ -0.27
CCR9P51686 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCR9P51686 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.36□□□□□ -0.27
CCR9P51686 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.36□□□□□ -0.27
CCR9P51686 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CCR9P51686 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.36□□□□□ -0.27
CCR9P51686 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCR9P51686 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
CCR9P51686 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CCR9P51686 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.36□□□□□ -0.27
CCR9P51686 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCR9P51686 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
CCR9P51686 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCR9P51686 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCR9P51686 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.36□□□□□ -0.27
CCR9P51686 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCR9P51686 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCR9P51686 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCR9P51686 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCR9P51686 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCR9P51686 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCR9P51686 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCR9P51686 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCR9P51686 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.36□□□□□ -0.27
CCR9P51686 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCR9P51686 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CCR9P51686 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCR9P51686 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCR9P51686 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCR9P51686 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCR9P51686 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CCR9P51686 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCR9P51686 AC055811.4-201ENST00000624039 1754 ntBASIC13.35□□□□□ -0.27
CCR9P51686 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCR9P51686 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CCR9P51686 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCR9P51686 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCR9P51686 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.35□□□□□ -0.27
CCR9P51686 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCR9P51686 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CCR9P51686 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCR9P51686 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCR9P51686 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.35□□□□□ -0.27
CCR9P51686 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCR9P51686 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCR9P51686 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCR9P51686 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCR9P51686 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCR9P51686 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCR9P51686 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CCR9P51686 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCR9P51686 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.35□□□□□ -0.27
CCR9P51686 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCR9P51686 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.35□□□□□ -0.27
CCR9P51686 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.35□□□□□ -0.27
CCR9P51686 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.35□□□□□ -0.27
CCR9P51686 RN7SL618P-201ENST00000477850 296 ntBASIC13.35□□□□□ -0.27
CCR9P51686 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCR9P51686 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCR9P51686 AC069262.1-201ENST00000539058 672 ntBASIC13.35□□□□□ -0.27
CCR9P51686 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.35□□□□□ -0.27
CCR9P51686 AL512361.1-201ENST00000554200 418 ntBASIC13.35□□□□□ -0.27
CCR9P51686 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CCR9P51686 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.35□□□□□ -0.27
CCR9P51686 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCR9P51686 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CCR9P51686 AC051619.7-201ENST00000568314 623 ntBASIC13.35□□□□□ -0.27
CCR9P51686 MIR3687-2-201ENST00000577708 61 ntBASIC13.35□□□□□ -0.27
CCR9P51686 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.35□□□□□ -0.27
CCR9P51686 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.35□□□□□ -0.27
CCR9P51686 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms