Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MRE11P49959 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MRE11P49959 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MRE11P49959 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.73■□□□□ 0.43
MRE11P49959 RNU1-129P-201ENST00000384064 167 ntBASIC17.73■□□□□ 0.43
MRE11P49959 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.73■□□□□ 0.43
MRE11P49959 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.73■□□□□ 0.43
MRE11P49959 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.73■□□□□ 0.43
MRE11P49959 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
MRE11P49959 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MRE11P49959 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.73■□□□□ 0.43
MRE11P49959 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.73■□□□□ 0.43
MRE11P49959 U1.21-201ENST00000580816 167 ntBASIC17.73■□□□□ 0.43
MRE11P49959 SPDYE22P-201ENST00000582158 798 ntBASIC17.73■□□□□ 0.43
MRE11P49959 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.73■□□□□ 0.43
MRE11P49959 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.73■□□□□ 0.43
MRE11P49959 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MRE11P49959 GOLGA8VP-201ENST00000559009 1798 ntBASIC17.73■□□□□ 0.43
MRE11P49959 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MRE11P49959 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MRE11P49959 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MRE11P49959 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MRE11P49959 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
MRE11P49959 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MRE11P49959 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MRE11P49959 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MRE11P49959 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRE11P49959 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
MRE11P49959 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRE11P49959 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MRE11P49959 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRE11P49959 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC17.72■□□□□ 0.43
MRE11P49959 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
MRE11P49959 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRE11P49959 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC17.72■□□□□ 0.43
MRE11P49959 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRE11P49959 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
MRE11P49959 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC17.72■□□□□ 0.43
MRE11P49959 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRE11P49959 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MRE11P49959 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRE11P49959 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRE11P49959 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.72■□□□□ 0.43
MRE11P49959 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.72■□□□□ 0.43
MRE11P49959 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.72■□□□□ 0.43
MRE11P49959 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC17.72■□□□□ 0.43
MRE11P49959 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRE11P49959 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRE11P49959 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.72■□□□□ 0.43
MRE11P49959 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.72■□□□□ 0.43
MRE11P49959 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
MRE11P49959 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.72■□□□□ 0.43
MRE11P49959 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
MRE11P49959 HILS1-202ENST00000545329 423 ntBASIC17.72■□□□□ 0.43
MRE11P49959 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.72■□□□□ 0.43
MRE11P49959 KRT19P2-202ENST00000557173 1012 ntBASIC17.72■□□□□ 0.43
MRE11P49959 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.72■□□□□ 0.43
MRE11P49959 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.72■□□□□ 0.43
MRE11P49959 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.72■□□□□ 0.43
MRE11P49959 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.72■□□□□ 0.43
MRE11P49959 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
MRE11P49959 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRE11P49959 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRE11P49959 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.72■□□□□ 0.43
MRE11P49959 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRE11P49959 AP000845.1-201ENST00000581677 2131 ntBASIC17.72■□□□□ 0.43
MRE11P49959 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRE11P49959 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.72■□□□□ 0.43
MRE11P49959 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
MRE11P49959 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
MRE11P49959 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
MRE11P49959 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MRE11P49959 AL133338.1-201ENST00000565695 1517 ntBASIC17.72■□□□□ 0.43
MRE11P49959 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC17.72■□□□□ 0.43
MRE11P49959 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRE11P49959 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
MRE11P49959 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC17.71■□□□□ 0.43
MRE11P49959 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MRE11P49959 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.71■□□□□ 0.43
MRE11P49959 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MRE11P49959 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MRE11P49959 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.71■□□□□ 0.43
MRE11P49959 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MRE11P49959 BNIP3P1-202ENST00000550043 1585 ntBASIC17.71■□□□□ 0.43
MRE11P49959 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
MRE11P49959 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.71■□□□□ 0.43
MRE11P49959 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
MRE11P49959 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
MRE11P49959 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MRE11P49959 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
MRE11P49959 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MRE11P49959 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MRE11P49959 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MRE11P49959 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
MRE11P49959 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MRE11P49959 AC074386.1-202ENST00000463561 864 ntBASIC17.71■□□□□ 0.43
MRE11P49959 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.71■□□□□ 0.43
MRE11P49959 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.71■□□□□ 0.43
MRE11P49959 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.71■□□□□ 0.43
MRE11P49959 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms