Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.24■□□□□ 0.03
CHRNA4P43681 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.24■□□□□ 0.03
CHRNA4P43681 TMEM14DP-201ENST00000422205 345 ntBASIC15.24■□□□□ 0.03
CHRNA4P43681 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.24■□□□□ 0.03
CHRNA4P43681 ACTG1P3-201ENST00000431775 1114 ntBASIC15.24■□□□□ 0.03
CHRNA4P43681 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.24■□□□□ 0.03
CHRNA4P43681 KRT18P25-201ENST00000508931 1278 ntBASIC15.24■□□□□ 0.03
CHRNA4P43681 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.24■□□□□ 0.03
CHRNA4P43681 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.24■□□□□ 0.03
CHRNA4P43681 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.24■□□□□ 0.03
CHRNA4P43681 AC009486.1-201ENST00000569860 813 ntBASIC15.24■□□□□ 0.03
CHRNA4P43681 AC132938.2-201ENST00000579188 680 ntBASIC15.24■□□□□ 0.03
CHRNA4P43681 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.24■□□□□ 0.03
CHRNA4P43681 AC027307.3-201ENST00000594262 1100 ntBASIC15.24■□□□□ 0.03
CHRNA4P43681 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.24■□□□□ 0.03
CHRNA4P43681 AL591163.1-201ENST00000641757 987 ntBASIC15.24■□□□□ 0.03
CHRNA4P43681 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA4P43681 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CHRNA4P43681 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA4P43681 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA4P43681 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA4P43681 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.24■□□□□ 0.03
CHRNA4P43681 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA4P43681 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA4P43681 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA4P43681 AC007292.2-201ENST00000593524 1812 ntBASIC15.24■□□□□ 0.03
CHRNA4P43681 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA4P43681 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA4P43681 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA4P43681 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CHRNA4P43681 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CHRNA4P43681 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CHRNA4P43681 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA4P43681 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.23■□□□□ 0.03
CHRNA4P43681 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.23■□□□□ 0.03
CHRNA4P43681 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRNA4P43681 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.23■□□□□ 0.03
CHRNA4P43681 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRNA4P43681 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRNA4P43681 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRNA4P43681 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRNA4P43681 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRNA4P43681 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.23■□□□□ 0.03
CHRNA4P43681 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CHRNA4P43681 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.23■□□□□ 0.03
CHRNA4P43681 AC134312.5-201ENST00000568031 1313 ntBASIC15.23■□□□□ 0.03
CHRNA4P43681 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.23■□□□□ 0.03
CHRNA4P43681 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRNA4P43681 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRNA4P43681 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.23■□□□□ 0.03
CHRNA4P43681 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRNA4P43681 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHRNA4P43681 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRNA4P43681 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRNA4P43681 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRNA4P43681 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CHRNA4P43681 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
CHRNA4P43681 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.23■□□□□ 0.03
CHRNA4P43681 AL035633.1-201ENST00000406139 838 ntBASIC15.23■□□□□ 0.03
CHRNA4P43681 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
CHRNA4P43681 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.23■□□□□ 0.03
CHRNA4P43681 BAATP1-201ENST00000412284 1225 ntBASIC15.23■□□□□ 0.03
CHRNA4P43681 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.23■□□□□ 0.03
CHRNA4P43681 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.23■□□□□ 0.03
CHRNA4P43681 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRNA4P43681 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.23■□□□□ 0.03
CHRNA4P43681 AC012441.1-201ENST00000446669 685 ntBASIC15.23■□□□□ 0.03
CHRNA4P43681 AC068587.3-201ENST00000526613 355 ntBASIC15.23■□□□□ 0.03
CHRNA4P43681 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.23■□□□□ 0.03
CHRNA4P43681 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.23■□□□□ 0.03
CHRNA4P43681 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CHRNA4P43681 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CHRNA4P43681 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHRNA4P43681 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRNA4P43681 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRNA4P43681 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CHRNA4P43681 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.23■□□□□ 0.03
CHRNA4P43681 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRNA4P43681 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRNA4P43681 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRNA4P43681 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.23■□□□□ 0.03
CHRNA4P43681 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRNA4P43681 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHRNA4P43681 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.23■□□□□ 0.03
CHRNA4P43681 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.23■□□□□ 0.03
CHRNA4P43681 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA4P43681 AC097359.2-201ENST00000604992 2389 ntBASIC15.22■□□□□ 0.03
CHRNA4P43681 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA4P43681 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA4P43681 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA4P43681 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.22■□□□□ 0.03
CHRNA4P43681 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA4P43681 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.22■□□□□ 0.03
CHRNA4P43681 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA4P43681 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA4P43681 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.22■□□□□ 0.03
CHRNA4P43681 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.22■□□□□ 0.03
CHRNA4P43681 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CHRNA4P43681 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA4P43681 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 248.5 ms