Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNFSF9P41273 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TNFSF9P41273 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNFSF9P41273 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.27■□□□□ 0.2
TNFSF9P41273 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TNFSF9P41273 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.27■□□□□ 0.2
TNFSF9P41273 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
TNFSF9P41273 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNFSF9P41273 MIR1908-201ENST00000410394 80 ntBASIC16.27■□□□□ 0.2
TNFSF9P41273 AC004945.1-201ENST00000416738 983 ntBASIC16.27■□□□□ 0.2
TNFSF9P41273 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
TNFSF9P41273 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.27■□□□□ 0.2
TNFSF9P41273 AC007969.1-201ENST00000433675 447 ntBASIC16.27■□□□□ 0.2
TNFSF9P41273 HOMER2P2-201ENST00000451621 847 ntBASIC16.27■□□□□ 0.2
TNFSF9P41273 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TNFSF9P41273 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.27■□□□□ 0.2
TNFSF9P41273 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.27■□□□□ 0.2
TNFSF9P41273 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TNFSF9P41273 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.27■□□□□ 0.2
TNFSF9P41273 RN7SL560P-201ENST00000577943 264 ntBASIC16.27■□□□□ 0.2
TNFSF9P41273 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.27■□□□□ 0.2
TNFSF9P41273 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.27■□□□□ 0.2
TNFSF9P41273 SALL4P5-201ENST00000419001 1760 ntBASIC16.27■□□□□ 0.2
TNFSF9P41273 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TNFSF9P41273 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNFSF9P41273 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TNFSF9P41273 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TNFSF9P41273 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TNFSF9P41273 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
TNFSF9P41273 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
TNFSF9P41273 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
TNFSF9P41273 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
TNFSF9P41273 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TNFSF9P41273 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
TNFSF9P41273 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
TNFSF9P41273 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TNFSF9P41273 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.26■□□□□ 0.19
TNFSF9P41273 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNFSF9P41273 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TNFSF9P41273 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TNFSF9P41273 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.26■□□□□ 0.19
TNFSF9P41273 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNFSF9P41273 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TNFSF9P41273 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNFSF9P41273 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.26■□□□□ 0.19
TNFSF9P41273 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.26■□□□□ 0.19
TNFSF9P41273 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TNFSF9P41273 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNFSF9P41273 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TNFSF9P41273 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.26■□□□□ 0.19
TNFSF9P41273 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TNFSF9P41273 AL023775.1-201ENST00000454907 1746 ntBASIC16.26■□□□□ 0.19
TNFSF9P41273 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNFSF9P41273 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNFSF9P41273 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.26■□□□□ 0.19
TNFSF9P41273 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.26■□□□□ 0.19
TNFSF9P41273 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
TNFSF9P41273 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.26■□□□□ 0.19
TNFSF9P41273 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.26■□□□□ 0.19
TNFSF9P41273 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.26■□□□□ 0.19
TNFSF9P41273 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.26■□□□□ 0.19
TNFSF9P41273 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.26■□□□□ 0.19
TNFSF9P41273 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.26■□□□□ 0.19
TNFSF9P41273 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.26■□□□□ 0.19
TNFSF9P41273 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNFSF9P41273 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.26■□□□□ 0.19
TNFSF9P41273 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TNFSF9P41273 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.26■□□□□ 0.19
TNFSF9P41273 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TNFSF9P41273 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.26■□□□□ 0.19
TNFSF9P41273 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TNFSF9P41273 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.26■□□□□ 0.19
TNFSF9P41273 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.26■□□□□ 0.19
TNFSF9P41273 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.26■□□□□ 0.19
TNFSF9P41273 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNFSF9P41273 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
TNFSF9P41273 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.26■□□□□ 0.19
TNFSF9P41273 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNFSF9P41273 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFSF9P41273 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFSF9P41273 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFSF9P41273 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFSF9P41273 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFSF9P41273 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.25■□□□□ 0.19
TNFSF9P41273 LINC01101-201ENST00000622953 1884 ntBASIC16.25■□□□□ 0.19
TNFSF9P41273 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.25■□□□□ 0.19
TNFSF9P41273 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFSF9P41273 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFSF9P41273 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFSF9P41273 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFSF9P41273 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFSF9P41273 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFSF9P41273 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.25■□□□□ 0.19
TNFSF9P41273 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TNFSF9P41273 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.25■□□□□ 0.19
TNFSF9P41273 CHMP1AP1-201ENST00000445563 662 ntBASIC16.25■□□□□ 0.19
TNFSF9P41273 AL355994.2-201ENST00000447882 704 ntBASIC16.25■□□□□ 0.19
TNFSF9P41273 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.25■□□□□ 0.19
TNFSF9P41273 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TNFSF9P41273 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms