Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LSP1P33241 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LSP1P33241 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LSP1P33241 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LSP1P33241 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
LSP1P33241 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LSP1P33241 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC15.21■□□□□ 0.03
LSP1P33241 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LSP1P33241 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.21■□□□□ 0.03
LSP1P33241 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
LSP1P33241 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LSP1P33241 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LSP1P33241 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.02
LSP1P33241 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LSP1P33241 AMT-221ENST00000538581 2038 ntTSL 2 BASIC15.21■□□□□ 0.02
LSP1P33241 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.2■□□□□ 0.02
LSP1P33241 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LSP1P33241 CES1P1-201ENST00000421606 1704 ntBASIC15.2■□□□□ 0.02
LSP1P33241 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC15.2■□□□□ 0.02
LSP1P33241 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LSP1P33241 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
LSP1P33241 AL365181.3-201ENST00000605886 3222 ntBASIC15.2■□□□□ 0.02
LSP1P33241 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC15.2■□□□□ 0.02
LSP1P33241 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
LSP1P33241 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LSP1P33241 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC15.2■□□□□ 0.02
LSP1P33241 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.2■□□□□ 0.02
LSP1P33241 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.2■□□□□ 0.02
LSP1P33241 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LSP1P33241 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.2■□□□□ 0.02
LSP1P33241 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.2■□□□□ 0.02
LSP1P33241 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.2■□□□□ 0.02
LSP1P33241 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LSP1P33241 RNA5SP410-201ENST00000516285 106 ntBASIC15.2■□□□□ 0.02
LSP1P33241 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.2■□□□□ 0.02
LSP1P33241 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.2■□□□□ 0.02
LSP1P33241 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.2■□□□□ 0.02
LSP1P33241 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.2■□□□□ 0.02
LSP1P33241 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
LSP1P33241 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.2■□□□□ 0.02
LSP1P33241 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LSP1P33241 AC008735.5-201ENST00000623544 497 ntBASIC15.2■□□□□ 0.02
LSP1P33241 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
LSP1P33241 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.2■□□□□ 0.02
LSP1P33241 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LSP1P33241 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LSP1P33241 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LSP1P33241 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LSP1P33241 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LSP1P33241 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LSP1P33241 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LSP1P33241 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LSP1P33241 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.2■□□□□ 0.02
LSP1P33241 OS9-206ENST00000435406 2346 ntTSL 2 BASIC15.2■□□□□ 0.02
LSP1P33241 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LSP1P33241 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LSP1P33241 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LSP1P33241 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LSP1P33241 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
LSP1P33241 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LSP1P33241 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
LSP1P33241 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LSP1P33241 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LSP1P33241 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LSP1P33241 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LSP1P33241 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LSP1P33241 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LSP1P33241 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LSP1P33241 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.19■□□□□ 0.02
LSP1P33241 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.19■□□□□ 0.02
LSP1P33241 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.19■□□□□ 0.02
LSP1P33241 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.19■□□□□ 0.02
LSP1P33241 AC105233.2-201ENST00000523697 349 ntBASIC15.19■□□□□ 0.02
LSP1P33241 AF228730.5-201ENST00000530288 346 ntBASIC15.19■□□□□ 0.02
LSP1P33241 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LSP1P33241 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.19■□□□□ 0.02
LSP1P33241 RN7SL510P-201ENST00000581311 263 ntBASIC15.19■□□□□ 0.02
LSP1P33241 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.19■□□□□ 0.02
LSP1P33241 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
LSP1P33241 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
LSP1P33241 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LSP1P33241 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LSP1P33241 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LSP1P33241 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LSP1P33241 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LSP1P33241 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.19■□□□□ 0.02
LSP1P33241 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LSP1P33241 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LSP1P33241 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC15.19■□□□□ 0.02
LSP1P33241 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
LSP1P33241 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LSP1P33241 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.19■□□□□ 0.02
LSP1P33241 PCDHB18P-202ENST00000526308 3197 ntBASIC15.19■□□□□ 0.02
LSP1P33241 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LSP1P33241 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LSP1P33241 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LSP1P33241 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LSP1P33241 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LSP1P33241 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LSP1P33241 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms