Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
MMP8P22894 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
MMP8P22894 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
MMP8P22894 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.13
MMP8P22894 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.83■□□□□ 0.13
MMP8P22894 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
MMP8P22894 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
MMP8P22894 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
MMP8P22894 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.83■□□□□ 0.13
MMP8P22894 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP8P22894 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.83■□□□□ 0.12
MMP8P22894 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.83■□□□□ 0.12
MMP8P22894 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP8P22894 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.83■□□□□ 0.12
MMP8P22894 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.83■□□□□ 0.12
MMP8P22894 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.83■□□□□ 0.12
MMP8P22894 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.83■□□□□ 0.12
MMP8P22894 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP8P22894 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.83■□□□□ 0.12
MMP8P22894 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP8P22894 POM121L8P-201ENST00000417732 1281 ntBASIC15.83■□□□□ 0.12
MMP8P22894 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
MMP8P22894 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.83■□□□□ 0.12
MMP8P22894 AC245100.3-201ENST00000441281 285 ntBASIC15.83■□□□□ 0.12
MMP8P22894 POM121L9P-203ENST00000441984 1285 ntBASIC15.83■□□□□ 0.12
MMP8P22894 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.83■□□□□ 0.12
MMP8P22894 TPT1P11-201ENST00000458482 498 ntBASIC15.83■□□□□ 0.12
MMP8P22894 RN7SL692P-201ENST00000464677 288 ntBASIC15.83■□□□□ 0.12
MMP8P22894 AC011495.1-201ENST00000498085 584 ntBASIC15.83■□□□□ 0.12
MMP8P22894 AP001889.1-201ENST00000525414 633 ntBASIC15.83■□□□□ 0.12
MMP8P22894 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.83■□□□□ 0.12
MMP8P22894 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.83■□□□□ 0.12
MMP8P22894 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MMP8P22894 RN7SL48P-201ENST00000579283 293 ntBASIC15.83■□□□□ 0.12
MMP8P22894 MIR3197-201ENST00000582241 73 ntBASIC15.83■□□□□ 0.12
MMP8P22894 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
MMP8P22894 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
MMP8P22894 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.83■□□□□ 0.12
MMP8P22894 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.83■□□□□ 0.12
MMP8P22894 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
MMP8P22894 AL138725.1-201ENST00000407347 1314 ntBASIC15.83■□□□□ 0.12
MMP8P22894 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.83■□□□□ 0.12
MMP8P22894 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP8P22894 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.83■□□□□ 0.12
MMP8P22894 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MMP8P22894 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP8P22894 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP8P22894 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.83■□□□□ 0.12
MMP8P22894 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP8P22894 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP8P22894 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP8P22894 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MMP8P22894 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP8P22894 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.82■□□□□ 0.12
MMP8P22894 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
MMP8P22894 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP8P22894 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP8P22894 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MMP8P22894 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP8P22894 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP8P22894 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP8P22894 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP8P22894 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.82■□□□□ 0.12
MMP8P22894 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP8P22894 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MMP8P22894 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.82■□□□□ 0.12
MMP8P22894 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP8P22894 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.82■□□□□ 0.12
MMP8P22894 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.82■□□□□ 0.12
MMP8P22894 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
MMP8P22894 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.82■□□□□ 0.12
MMP8P22894 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.82■□□□□ 0.12
MMP8P22894 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.82■□□□□ 0.12
MMP8P22894 AC007389.4-201ENST00000454674 793 ntBASIC15.82■□□□□ 0.12
MMP8P22894 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.82■□□□□ 0.12
MMP8P22894 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP8P22894 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.82■□□□□ 0.12
MMP8P22894 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.82■□□□□ 0.12
MMP8P22894 AC106760.1-201ENST00000508690 800 ntBASIC15.82■□□□□ 0.12
MMP8P22894 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
MMP8P22894 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.82■□□□□ 0.12
MMP8P22894 AP005018.1-201ENST00000525475 301 ntBASIC15.82■□□□□ 0.12
MMP8P22894 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
MMP8P22894 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MMP8P22894 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.82■□□□□ 0.12
MMP8P22894 AL596325.1-201ENST00000563991 1082 ntBASIC15.82■□□□□ 0.12
MMP8P22894 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.82■□□□□ 0.12
MMP8P22894 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP8P22894 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.82■□□□□ 0.12
MMP8P22894 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP8P22894 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
MMP8P22894 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.82■□□□□ 0.12
MMP8P22894 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
MMP8P22894 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP8P22894 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.82■□□□□ 0.12
MMP8P22894 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP8P22894 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.82■□□□□ 0.12
MMP8P22894 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
MMP8P22894 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
MMP8P22894 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms