Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.28■□□□□ 0.04
VCLP18206 CTBP2P3-201ENST00000585629 1255 ntBASIC15.28■□□□□ 0.04
VCLP18206 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
VCLP18206 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.28■□□□□ 0.04
VCLP18206 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VCLP18206 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.28■□□□□ 0.04
VCLP18206 AL033527.5-201ENST00000641382 801 ntBASIC15.28■□□□□ 0.04
VCLP18206 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
VCLP18206 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.28■□□□□ 0.04
VCLP18206 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
VCLP18206 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VCLP18206 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VCLP18206 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.28■□□□□ 0.04
VCLP18206 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VCLP18206 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
VCLP18206 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
VCLP18206 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
VCLP18206 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
VCLP18206 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VCLP18206 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.28■□□□□ 0.04
VCLP18206 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.27■□□□□ 0.04
VCLP18206 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VCLP18206 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VCLP18206 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
VCLP18206 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VCLP18206 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
VCLP18206 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
VCLP18206 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VCLP18206 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.27■□□□□ 0.04
VCLP18206 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
VCLP18206 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
VCLP18206 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VCLP18206 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
VCLP18206 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VCLP18206 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
VCLP18206 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
VCLP18206 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VCLP18206 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VCLP18206 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VCLP18206 C1QBPP1-201ENST00000400117 770 ntBASIC15.27■□□□□ 0.04
VCLP18206 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
VCLP18206 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.27■□□□□ 0.04
VCLP18206 GAPDHP21-201ENST00000450301 1010 ntBASIC15.27■□□□□ 0.04
VCLP18206 VDAC1P7-201ENST00000462417 847 ntBASIC15.27■□□□□ 0.04
VCLP18206 ENPP7P5-201ENST00000541031 1031 ntBASIC15.27■□□□□ 0.04
VCLP18206 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.27■□□□□ 0.04
VCLP18206 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.27■□□□□ 0.04
VCLP18206 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.27■□□□□ 0.04
VCLP18206 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.27■□□□□ 0.04
VCLP18206 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.27■□□□□ 0.04
VCLP18206 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
VCLP18206 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
VCLP18206 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
VCLP18206 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.27■□□□□ 0.03
VCLP18206 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.27■□□□□ 0.03
VCLP18206 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
VCLP18206 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
VCLP18206 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
VCLP18206 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.27■□□□□ 0.03
VCLP18206 AC023024.2-201ENST00000623561 1993 ntBASIC15.27■□□□□ 0.03
VCLP18206 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
VCLP18206 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
VCLP18206 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
VCLP18206 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
VCLP18206 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
VCLP18206 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
VCLP18206 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.27■□□□□ 0.03
VCLP18206 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
VCLP18206 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
VCLP18206 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
VCLP18206 KRT8P22-201ENST00000562317 1415 ntBASIC15.26■□□□□ 0.03
VCLP18206 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VCLP18206 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VCLP18206 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
VCLP18206 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
VCLP18206 OR2I1P-209ENST00000641730 5365 ntBASIC15.26■□□□□ 0.03
VCLP18206 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.26■□□□□ 0.03
VCLP18206 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VCLP18206 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VCLP18206 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
VCLP18206 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
VCLP18206 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VCLP18206 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.26■□□□□ 0.03
VCLP18206 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
VCLP18206 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VCLP18206 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VCLP18206 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
VCLP18206 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VCLP18206 COX5BP8-201ENST00000416911 349 ntBASIC15.26■□□□□ 0.03
VCLP18206 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VCLP18206 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.26■□□□□ 0.03
VCLP18206 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.26■□□□□ 0.03
VCLP18206 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.26■□□□□ 0.03
VCLP18206 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
VCLP18206 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.26■□□□□ 0.03
VCLP18206 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
VCLP18206 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.26■□□□□ 0.03
VCLP18206 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
VCLP18206 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
VCLP18206 AC120045.2-201ENST00000567334 178 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms