Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL4P13236 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL4P13236 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL4P13236 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CCL4P13236 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL4P13236 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.13□□□□□ -0.15
CCL4P13236 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.13□□□□□ -0.15
CCL4P13236 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.13□□□□□ -0.15
CCL4P13236 C18orf15-201ENST00000623680 2534 ntBASIC14.13□□□□□ -0.15
CCL4P13236 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.13□□□□□ -0.15
CCL4P13236 AC068587.6-202ENST00000641839 5619 ntBASIC14.13□□□□□ -0.15
CCL4P13236 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL4P13236 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.13□□□□□ -0.15
CCL4P13236 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCL4P13236 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.13□□□□□ -0.15
CCL4P13236 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL4P13236 AC023024.2-201ENST00000623561 1993 ntBASIC14.13□□□□□ -0.15
CCL4P13236 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.13□□□□□ -0.15
CCL4P13236 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL4P13236 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL4P13236 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL4P13236 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL4P13236 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL4P13236 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCL4P13236 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL4P13236 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCL4P13236 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL4P13236 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL4P13236 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC14.13□□□□□ -0.15
CCL4P13236 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC14.13□□□□□ -0.15
CCL4P13236 PDIA3P2-201ENST00000428073 158 ntBASIC14.13□□□□□ -0.15
CCL4P13236 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC14.13□□□□□ -0.15
CCL4P13236 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCL4P13236 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.13□□□□□ -0.15
CCL4P13236 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.13□□□□□ -0.15
CCL4P13236 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.13□□□□□ -0.15
CCL4P13236 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.13□□□□□ -0.15
CCL4P13236 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC14.13□□□□□ -0.15
CCL4P13236 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC14.13□□□□□ -0.15
CCL4P13236 AC116345.2-201ENST00000512837 523 ntBASIC14.13□□□□□ -0.15
CCL4P13236 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CCL4P13236 RTN3P1-201ENST00000536295 711 ntBASIC14.13□□□□□ -0.15
CCL4P13236 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.13□□□□□ -0.15
CCL4P13236 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCL4P13236 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CCL4P13236 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.13□□□□□ -0.15
CCL4P13236 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.13□□□□□ -0.15
CCL4P13236 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.13□□□□□ -0.15
CCL4P13236 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.13□□□□□ -0.15
CCL4P13236 Z98259.2-201ENST00000641583 609 ntBASIC14.13□□□□□ -0.15
CCL4P13236 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL4P13236 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL4P13236 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL4P13236 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.13□□□□□ -0.15
CCL4P13236 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL4P13236 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.13□□□□□ -0.15
CCL4P13236 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL4P13236 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL4P13236 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL4P13236 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL4P13236 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCL4P13236 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL4P13236 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.13□□□□□ -0.15
CCL4P13236 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL4P13236 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.13□□□□□ -0.15
CCL4P13236 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL4P13236 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.13□□□□□ -0.15
CCL4P13236 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL4P13236 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CCL4P13236 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL4P13236 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL4P13236 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL4P13236 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL4P13236 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCL4P13236 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCL4P13236 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
CCL4P13236 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL4P13236 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL4P13236 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL4P13236 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL4P13236 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL4P13236 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.12□□□□□ -0.15
CCL4P13236 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL4P13236 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCL4P13236 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.12□□□□□ -0.15
CCL4P13236 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL4P13236 FAM90A7P-201ENST00000382628 1395 ntBASIC14.12□□□□□ -0.15
CCL4P13236 FAM90A23P-201ENST00000400136 1395 ntBASIC14.12□□□□□ -0.15
CCL4P13236 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL4P13236 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCL4P13236 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL4P13236 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL4P13236 SALL4P5-201ENST00000419001 1760 ntBASIC14.12□□□□□ -0.15
CCL4P13236 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL4P13236 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CCL4P13236 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCL4P13236 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL4P13236 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CCL4P13236 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL4P13236 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms