Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.3■□□□□ 0.04
HLA-DQB2P05538 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DQB2P05538 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HLA-DQB2P05538 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.3■□□□□ 0.04
HLA-DQB2P05538 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.3■□□□□ 0.04
HLA-DQB2P05538 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
HLA-DQB2P05538 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DQB2P05538 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DQB2P05538 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.3■□□□□ 0.04
HLA-DQB2P05538 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DQB2P05538 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DQB2P05538 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 AC099063.4-201ENST00000641099 1602 ntBASIC15.29■□□□□ 0.04
HLA-DQB2P05538 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 POM121L8P-201ENST00000417732 1281 ntBASIC15.29■□□□□ 0.04
HLA-DQB2P05538 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 POM121L9P-203ENST00000441984 1285 ntBASIC15.29■□□□□ 0.04
HLA-DQB2P05538 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 KRT17P7-201ENST00000451704 1104 ntBASIC15.29■□□□□ 0.04
HLA-DQB2P05538 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 AC025279.2-201ENST00000569730 653 ntBASIC15.29■□□□□ 0.04
HLA-DQB2P05538 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 BTNL10-201ENST00000595971 695 ntBASIC15.29■□□□□ 0.04
HLA-DQB2P05538 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 ENPP7P14-201ENST00000621765 1040 ntBASIC15.29■□□□□ 0.04
HLA-DQB2P05538 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 AC140479.7-201ENST00000636301 2332 ntBASIC15.29■□□□□ 0.04
HLA-DQB2P05538 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DQB2P05538 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 CLUHP2-201ENST00000426660 1303 ntBASIC15.28■□□□□ 0.04
HLA-DQB2P05538 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 AC245100.3-201ENST00000441281 285 ntBASIC15.28■□□□□ 0.04
HLA-DQB2P05538 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 FTH1P14-201ENST00000482930 551 ntBASIC15.28■□□□□ 0.04
HLA-DQB2P05538 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms