Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TCRAP04437 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TCRAP04437 AL354702.1-201ENST00000442006 1960 ntBASIC11.55□□□□□ -0.56
TCRAP04437 AL031595.1-201ENST00000623969 4709 ntBASIC11.55□□□□□ -0.56
TCRAP04437 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
TCRAP04437 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC11.55□□□□□ -0.56
TCRAP04437 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
TCRAP04437 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TCRAP04437 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
TCRAP04437 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
TCRAP04437 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
TCRAP04437 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
TCRAP04437 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TCRAP04437 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
TCRAP04437 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC11.55□□□□□ -0.56
TCRAP04437 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
TCRAP04437 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
TCRAP04437 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TCRAP04437 AC089987.1-201ENST00000551654 2209 ntBASIC11.55□□□□□ -0.56
TCRAP04437 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TCRAP04437 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC11.55□□□□□ -0.56
TCRAP04437 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC11.55□□□□□ -0.56
TCRAP04437 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
TCRAP04437 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
TCRAP04437 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TCRAP04437 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TCRAP04437 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
TCRAP04437 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TCRAP04437 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TCRAP04437 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC11.54□□□□□ -0.56
TCRAP04437 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
TCRAP04437 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TCRAP04437 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TCRAP04437 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TCRAP04437 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TCRAP04437 MX1-218ENST00000619682 1980 ntTSL 5 BASIC11.54□□□□□ -0.56
TCRAP04437 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
TCRAP04437 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
TCRAP04437 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
TCRAP04437 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
TCRAP04437 APP-205ENST00000358918 2366 ntTSL 5 BASIC11.54□□□□□ -0.56
TCRAP04437 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
TCRAP04437 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
TCRAP04437 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
TCRAP04437 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC11.54□□□□□ -0.56
TCRAP04437 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC11.54□□□□□ -0.56
TCRAP04437 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
TCRAP04437 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TCRAP04437 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TCRAP04437 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TCRAP04437 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC11.54□□□□□ -0.56
TCRAP04437 AL450487.1-201ENST00000426799 995 ntBASIC11.54□□□□□ -0.56
TCRAP04437 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC11.54□□□□□ -0.56
TCRAP04437 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC11.54□□□□□ -0.56
TCRAP04437 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC11.54□□□□□ -0.56
TCRAP04437 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC11.54□□□□□ -0.56
TCRAP04437 PRR29-209ENST00000582540 967 ntTSL 2 BASIC11.54□□□□□ -0.56
TCRAP04437 AC140113.2-201ENST00000604370 208 ntBASIC11.54□□□□□ -0.56
TCRAP04437 RN7SL828P-201ENST00000607615 303 ntBASIC11.54□□□□□ -0.56
TCRAP04437 AC027601.4-201ENST00000611259 610 ntBASIC11.54□□□□□ -0.56
TCRAP04437 AC003101.2-201ENST00000612557 442 ntBASIC11.54□□□□□ -0.56
TCRAP04437 MIR6069-201ENST00000620069 79 ntBASIC11.54□□□□□ -0.56
TCRAP04437 CAND2-206ENST00000626378 333 ntTSL 5 BASIC11.54□□□□□ -0.56
TCRAP04437 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC11.54□□□□□ -0.56
TCRAP04437 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
TCRAP04437 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
TCRAP04437 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC11.54□□□□□ -0.56
TCRAP04437 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
TCRAP04437 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
TCRAP04437 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
TCRAP04437 PES1-204ENST00000402284 2144 ntTSL 5 BASIC11.54□□□□□ -0.56
TCRAP04437 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TCRAP04437 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
TCRAP04437 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC11.54□□□□□ -0.56
TCRAP04437 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TCRAP04437 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC11.54□□□□□ -0.56
TCRAP04437 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TCRAP04437 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TCRAP04437 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
TCRAP04437 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TCRAP04437 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TCRAP04437 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TCRAP04437 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
TCRAP04437 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
TCRAP04437 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC11.54□□□□□ -0.56
TCRAP04437 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
TCRAP04437 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
TCRAP04437 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
TCRAP04437 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
TCRAP04437 AL035456.1-201ENST00000456064 1369 ntBASIC11.54□□□□□ -0.56
TCRAP04437 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
TCRAP04437 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TCRAP04437 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TCRAP04437 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC11.53□□□□□ -0.56
TCRAP04437 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
TCRAP04437 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
TCRAP04437 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TCRAP04437 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
TCRAP04437 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TCRAP04437 KRT8P22-201ENST00000562317 1415 ntBASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms