Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CDH16O75309 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CDH16O75309 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH16O75309 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH16O75309 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH16O75309 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH16O75309 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CDH16O75309 CICP17-201ENST00000418553 2377 ntBASIC15.33■□□□□ 0.04
CDH16O75309 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH16O75309 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDH16O75309 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CDH16O75309 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH16O75309 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH16O75309 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH16O75309 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH16O75309 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH16O75309 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH16O75309 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH16O75309 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CDH16O75309 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH16O75309 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH16O75309 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CDH16O75309 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH16O75309 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH16O75309 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH16O75309 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH16O75309 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH16O75309 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH16O75309 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH16O75309 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.32■□□□□ 0.04
CDH16O75309 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH16O75309 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH16O75309 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH16O75309 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH16O75309 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH16O75309 TOMM22P5-201ENST00000416399 439 ntBASIC15.32■□□□□ 0.04
CDH16O75309 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH16O75309 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH16O75309 AC010327.4-202ENST00000591484 748 ntBASIC15.32■□□□□ 0.04
CDH16O75309 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH16O75309 GPALPP1-207ENST00000611650 899 ntBASIC15.32■□□□□ 0.04
CDH16O75309 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH16O75309 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH16O75309 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH16O75309 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CDH16O75309 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH16O75309 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH16O75309 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH16O75309 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH16O75309 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH16O75309 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CDH16O75309 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDH16O75309 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH16O75309 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
CDH16O75309 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH16O75309 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH16O75309 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDH16O75309 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH16O75309 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH16O75309 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH16O75309 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH16O75309 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.31■□□□□ 0.04
CDH16O75309 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
CDH16O75309 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH16O75309 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CDH16O75309 ELL2P1-201ENST00000413990 1906 ntBASIC15.31■□□□□ 0.04
CDH16O75309 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH16O75309 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH16O75309 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH16O75309 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CDH16O75309 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH16O75309 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH16O75309 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH16O75309 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH16O75309 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CDH16O75309 MTND6P24-201ENST00000440466 518 ntBASIC15.31■□□□□ 0.04
CDH16O75309 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH16O75309 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.31■□□□□ 0.04
CDH16O75309 AC112482.1-201ENST00000492080 688 ntBASIC15.31■□□□□ 0.04
CDH16O75309 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CDH16O75309 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
CDH16O75309 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.31■□□□□ 0.04
CDH16O75309 AL079307.3-201ENST00000556114 283 ntBASIC15.31■□□□□ 0.04
CDH16O75309 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
CDH16O75309 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CDH16O75309 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.31■□□□□ 0.04
CDH16O75309 AC074044.1-201ENST00000609673 707 ntBASIC15.31■□□□□ 0.04
CDH16O75309 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CDH16O75309 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.31■□□□□ 0.04
CDH16O75309 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH16O75309 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH16O75309 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH16O75309 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CDH16O75309 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH16O75309 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH16O75309 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH16O75309 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH16O75309 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH16O75309 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH16O75309 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms