Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE3O75131 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE3O75131 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.6□□□□□ -0.07
CPNE3O75131 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE3O75131 CNN2P8-201ENST00000421872 913 ntBASIC14.6□□□□□ -0.07
CPNE3O75131 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CPNE3O75131 ACTBP11-201ENST00000436287 1126 ntBASIC14.6□□□□□ -0.07
CPNE3O75131 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE3O75131 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.6□□□□□ -0.07
CPNE3O75131 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.6□□□□□ -0.07
CPNE3O75131 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.6□□□□□ -0.07
CPNE3O75131 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CPNE3O75131 AC023310.1-201ENST00000554836 735 ntBASIC14.6□□□□□ -0.07
CPNE3O75131 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.6□□□□□ -0.07
CPNE3O75131 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.6□□□□□ -0.07
CPNE3O75131 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.6□□□□□ -0.07
CPNE3O75131 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.6□□□□□ -0.07
CPNE3O75131 AC010328.2-201ENST00000597698 1111 ntBASIC14.6□□□□□ -0.07
CPNE3O75131 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.6□□□□□ -0.07
CPNE3O75131 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.6□□□□□ -0.07
CPNE3O75131 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.6□□□□□ -0.07
CPNE3O75131 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.6□□□□□ -0.07
CPNE3O75131 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE3O75131 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE3O75131 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
CPNE3O75131 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CPNE3O75131 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE3O75131 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE3O75131 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE3O75131 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE3O75131 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE3O75131 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CPNE3O75131 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE3O75131 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE3O75131 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.6□□□□□ -0.07
CPNE3O75131 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE3O75131 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.59□□□□□ -0.07
CPNE3O75131 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE3O75131 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE3O75131 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.59□□□□□ -0.07
CPNE3O75131 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
CPNE3O75131 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.59□□□□□ -0.07
CPNE3O75131 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.59□□□□□ -0.07
CPNE3O75131 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.59□□□□□ -0.07
CPNE3O75131 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE3O75131 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE3O75131 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
CPNE3O75131 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE3O75131 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
CPNE3O75131 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.59□□□□□ -0.07
CPNE3O75131 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE3O75131 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CPNE3O75131 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CPNE3O75131 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CPNE3O75131 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE3O75131 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.59□□□□□ -0.07
CPNE3O75131 ACTBP8-201ENST00000403258 1108 ntBASIC14.59□□□□□ -0.07
CPNE3O75131 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.59□□□□□ -0.07
CPNE3O75131 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.59□□□□□ -0.07
CPNE3O75131 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.59□□□□□ -0.07
CPNE3O75131 AC114812.1-204ENST00000449669 728 ntBASIC14.59□□□□□ -0.07
CPNE3O75131 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.59□□□□□ -0.07
CPNE3O75131 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CPNE3O75131 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.59□□□□□ -0.07
CPNE3O75131 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CPNE3O75131 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CPNE3O75131 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE3O75131 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.59□□□□□ -0.07
CPNE3O75131 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CPNE3O75131 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.59□□□□□ -0.07
CPNE3O75131 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
CPNE3O75131 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.59□□□□□ -0.07
CPNE3O75131 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.59□□□□□ -0.07
CPNE3O75131 MIR4525-201ENST00000580000 75 ntBASIC14.59□□□□□ -0.07
CPNE3O75131 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.59□□□□□ -0.07
CPNE3O75131 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.59□□□□□ -0.07
CPNE3O75131 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.59□□□□□ -0.07
CPNE3O75131 AC145423.3-201ENST00000615987 467 ntBASIC14.59□□□□□ -0.07
CPNE3O75131 AC138951.2-201ENST00000623455 1161 ntBASIC14.59□□□□□ -0.07
CPNE3O75131 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.59□□□□□ -0.07
CPNE3O75131 AC008687.7-202ENST00000637404 953 ntBASIC14.59□□□□□ -0.07
CPNE3O75131 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CPNE3O75131 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE3O75131 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE3O75131 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.59□□□□□ -0.07
CPNE3O75131 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE3O75131 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.59□□□□□ -0.07
CPNE3O75131 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CPNE3O75131 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE3O75131 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE3O75131 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE3O75131 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE3O75131 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CPNE3O75131 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
CPNE3O75131 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE3O75131 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CPNE3O75131 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.58□□□□□ -0.07
CPNE3O75131 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
CPNE3O75131 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.58□□□□□ -0.07
CPNE3O75131 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.58□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms