Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNND1O60716 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CTNND1O60716 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CTNND1O60716 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC17.54■□□□□ 0.4
CTNND1O60716 SPCS2P2-201ENST00000603270 608 ntBASIC17.54■□□□□ 0.4
CTNND1O60716 AL353770.1-201ENST00000614915 403 ntBASIC17.54■□□□□ 0.4
CTNND1O60716 SNX1-214ENST00000625244 324 ntTSL 5 BASIC17.54■□□□□ 0.4
CTNND1O60716 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNND1O60716 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CTNND1O60716 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CTNND1O60716 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTNND1O60716 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CTNND1O60716 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.54■□□□□ 0.4
CTNND1O60716 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNND1O60716 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNND1O60716 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNND1O60716 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTNND1O60716 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTNND1O60716 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNND1O60716 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTNND1O60716 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTNND1O60716 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTNND1O60716 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTNND1O60716 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.53■□□□□ 0.4
CTNND1O60716 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTNND1O60716 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CTNND1O60716 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CTNND1O60716 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.53■□□□□ 0.4
CTNND1O60716 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CTNND1O60716 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTNND1O60716 AC244394.1-201ENST00000435000 1665 ntBASIC17.53■□□□□ 0.4
CTNND1O60716 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTNND1O60716 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC17.53■□□□□ 0.4
CTNND1O60716 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC17.53■□□□□ 0.4
CTNND1O60716 MIR33B-201ENST00000385104 96 ntBASIC17.53■□□□□ 0.4
CTNND1O60716 MPV17-204ENST00000399052 749 ntTSL 4 BASIC17.53■□□□□ 0.4
CTNND1O60716 KLF2P1-201ENST00000447438 1042 ntBASIC17.53■□□□□ 0.4
CTNND1O60716 AL353637.1-201ENST00000451571 732 ntBASIC17.53■□□□□ 0.4
CTNND1O60716 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.53■□□□□ 0.4
CTNND1O60716 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC17.53■□□□□ 0.4
CTNND1O60716 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC17.53■□□□□ 0.4
CTNND1O60716 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTNND1O60716 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTNND1O60716 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTNND1O60716 AC009779.1-201ENST00000551138 283 ntBASIC17.53■□□□□ 0.4
CTNND1O60716 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC17.53■□□□□ 0.4
CTNND1O60716 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.53■□□□□ 0.4
CTNND1O60716 PRKXP1-201ENST00000561423 1122 ntBASIC17.53■□□□□ 0.4
CTNND1O60716 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.53■□□□□ 0.4
CTNND1O60716 NAT9-224ENST00000583757 583 ntTSL 3 BASIC17.53■□□□□ 0.4
CTNND1O60716 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.53■□□□□ 0.4
CTNND1O60716 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTNND1O60716 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
CTNND1O60716 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.53■□□□□ 0.4
CTNND1O60716 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTNND1O60716 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTNND1O60716 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.53■□□□□ 0.4
CTNND1O60716 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTNND1O60716 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTNND1O60716 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.52■□□□□ 0.4
CTNND1O60716 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTNND1O60716 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.52■□□□□ 0.4
CTNND1O60716 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTNND1O60716 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTNND1O60716 AL008718.2-201ENST00000609206 1313 ntBASIC17.52■□□□□ 0.4
CTNND1O60716 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.52■□□□□ 0.4
CTNND1O60716 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTNND1O60716 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTNND1O60716 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.52■□□□□ 0.4
CTNND1O60716 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTNND1O60716 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.52■□□□□ 0.4
CTNND1O60716 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTNND1O60716 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTNND1O60716 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.52■□□□□ 0.4
CTNND1O60716 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTNND1O60716 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
CTNND1O60716 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTNND1O60716 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTNND1O60716 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CTNND1O60716 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CTNND1O60716 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CTNND1O60716 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CTNND1O60716 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.52■□□□□ 0.4
CTNND1O60716 TLE1P1-201ENST00000422965 589 ntBASIC17.52■□□□□ 0.4
CTNND1O60716 AC234782.1-201ENST00000451950 919 ntBASIC17.52■□□□□ 0.4
CTNND1O60716 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC17.52■□□□□ 0.4
CTNND1O60716 ALG3P1-201ENST00000508806 1114 ntBASIC17.52■□□□□ 0.4
CTNND1O60716 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.52■□□□□ 0.4
CTNND1O60716 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CTNND1O60716 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CTNND1O60716 AC020922.3-201ENST00000595064 547 ntBASIC17.52■□□□□ 0.4
CTNND1O60716 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC17.52■□□□□ 0.4
CTNND1O60716 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC17.52■□□□□ 0.4
CTNND1O60716 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTNND1O60716 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.52■□□□□ 0.4
CTNND1O60716 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CTNND1O60716 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTNND1O60716 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTNND1O60716 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTNND1O60716 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms