Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC23.44■■□□□ 1.34
CHD1O14646 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
CHD1O14646 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC23.44■■□□□ 1.34
CHD1O14646 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
CHD1O14646 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CHD1O14646 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CHD1O14646 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CHD1O14646 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CHD1O14646 AP000244.1-201ENST00000424582 201 ntBASIC23.44■■□□□ 1.34
CHD1O14646 RN7SL173P-201ENST00000461853 292 ntBASIC23.44■■□□□ 1.34
CHD1O14646 AC092910.2-201ENST00000491262 348 ntBASIC23.44■■□□□ 1.34
CHD1O14646 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC23.44■■□□□ 1.34
CHD1O14646 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC23.44■■□□□ 1.34
CHD1O14646 ACY3-202ENST00000529256 933 ntTSL 3 BASIC23.44■■□□□ 1.34
CHD1O14646 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC23.44■■□□□ 1.34
CHD1O14646 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CHD1O14646 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CHD1O14646 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC23.44■■□□□ 1.34
CHD1O14646 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CHD1O14646 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC23.44■■□□□ 1.34
CHD1O14646 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CHD1O14646 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CHD1O14646 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CHD1O14646 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CHD1O14646 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CHD1O14646 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
CHD1O14646 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CHD1O14646 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
CHD1O14646 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC23.43■■□□□ 1.34
CHD1O14646 AL356000.1-201ENST00000441073 1238 ntBASIC23.43■■□□□ 1.34
CHD1O14646 RN7SL578P-201ENST00000477781 283 ntBASIC23.43■■□□□ 1.34
CHD1O14646 MIR2278-201ENST00000516344 96 ntBASIC23.43■■□□□ 1.34
CHD1O14646 AC004801.1-201ENST00000549557 360 ntBASIC23.43■■□□□ 1.34
CHD1O14646 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC23.43■■□□□ 1.34
CHD1O14646 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC23.43■■□□□ 1.34
CHD1O14646 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
CHD1O14646 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
CHD1O14646 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
CHD1O14646 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CHD1O14646 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CHD1O14646 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC23.42■■□□□ 1.34
CHD1O14646 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CHD1O14646 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC23.42■■□□□ 1.34
CHD1O14646 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CHD1O14646 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
CHD1O14646 MED15P3-201ENST00000413613 326 ntBASIC23.42■■□□□ 1.34
CHD1O14646 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC23.42■■□□□ 1.34
CHD1O14646 STK24P1-201ENST00000455035 1291 ntBASIC23.42■■□□□ 1.34
CHD1O14646 ALG1L15P-201ENST00000482834 794 ntBASIC23.42■■□□□ 1.34
CHD1O14646 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC23.42■■□□□ 1.34
CHD1O14646 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC23.42■■□□□ 1.34
CHD1O14646 HNRNPA1P5-201ENST00000558213 966 ntBASIC23.42■■□□□ 1.34
CHD1O14646 AL021707.6-201ENST00000609212 491 ntBASIC23.42■■□□□ 1.34
CHD1O14646 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CHD1O14646 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
CHD1O14646 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC23.42■■□□□ 1.34
CHD1O14646 AC105250.1-201ENST00000509378 2057 ntBASIC23.42■■□□□ 1.34
CHD1O14646 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC23.42■■□□□ 1.34
CHD1O14646 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CHD1O14646 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC23.42■■□□□ 1.34
CHD1O14646 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CHD1O14646 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
CHD1O14646 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CHD1O14646 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC23.42■■□□□ 1.34
CHD1O14646 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CHD1O14646 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CHD1O14646 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CHD1O14646 SNRPD2P2-201ENST00000473818 333 ntBASIC23.42■■□□□ 1.34
CHD1O14646 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CHD1O14646 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CHD1O14646 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CHD1O14646 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CHD1O14646 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC23.41■■□□□ 1.34
CHD1O14646 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
CHD1O14646 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CHD1O14646 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CHD1O14646 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CHD1O14646 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
CHD1O14646 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
CHD1O14646 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC23.41■■□□□ 1.34
CHD1O14646 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CHD1O14646 LY6E-215ENST00000523847 427 ntTSL 3 BASIC23.41■■□□□ 1.34
CHD1O14646 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC23.41■■□□□ 1.34
CHD1O14646 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CHD1O14646 AL603832.2-201ENST00000566195 2125 ntBASIC23.41■■□□□ 1.34
CHD1O14646 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC23.41■■□□□ 1.34
CHD1O14646 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC23.41■■□□□ 1.34
CHD1O14646 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CHD1O14646 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CHD1O14646 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
CHD1O14646 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC23.41■■□□□ 1.34
CHD1O14646 LINC00528-201ENST00000600723 2160 ntBASIC23.4■■□□□ 1.34
CHD1O14646 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
CHD1O14646 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CHD1O14646 GALP-202ENST00000440823 889 ntTSL 5 BASIC23.4■■□□□ 1.34
CHD1O14646 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC23.4■■□□□ 1.34
CHD1O14646 B9D1-206ENST00000461069 923 ntTSL 2 BASIC23.4■■□□□ 1.34
CHD1O14646 HNRNPA3P6-201ENST00000472163 1006 ntBASIC23.4■■□□□ 1.34
CHD1O14646 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC23.4■■□□□ 1.34
CHD1O14646 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC23.4■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms