Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.17■□□□□ 0.18
FOXN3O00409 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXN3O00409 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXN3O00409 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.17■□□□□ 0.18
FOXN3O00409 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.17■□□□□ 0.18
FOXN3O00409 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXN3O00409 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXN3O00409 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.17■□□□□ 0.18
FOXN3O00409 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXN3O00409 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXN3O00409 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FOXN3O00409 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC16.17■□□□□ 0.18
FOXN3O00409 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXN3O00409 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
FOXN3O00409 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.16■□□□□ 0.18
FOXN3O00409 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
FOXN3O00409 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXN3O00409 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXN3O00409 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXN3O00409 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
FOXN3O00409 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
FOXN3O00409 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXN3O00409 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXN3O00409 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.16■□□□□ 0.18
FOXN3O00409 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.16■□□□□ 0.18
FOXN3O00409 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXN3O00409 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.16■□□□□ 0.18
FOXN3O00409 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
FOXN3O00409 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.16■□□□□ 0.18
FOXN3O00409 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
FOXN3O00409 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.16■□□□□ 0.18
FOXN3O00409 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.16■□□□□ 0.18
FOXN3O00409 AP001063.1-201ENST00000568332 529 ntBASIC16.16■□□□□ 0.18
FOXN3O00409 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.16■□□□□ 0.18
FOXN3O00409 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.16■□□□□ 0.18
FOXN3O00409 AL033527.5-201ENST00000641382 801 ntBASIC16.16■□□□□ 0.18
FOXN3O00409 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.16■□□□□ 0.18
FOXN3O00409 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.16■□□□□ 0.18
FOXN3O00409 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
FOXN3O00409 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXN3O00409 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
FOXN3O00409 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
FOXN3O00409 UCKL1-AS1-201ENST00000623569 3602 ntBASIC16.16■□□□□ 0.18
FOXN3O00409 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXN3O00409 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXN3O00409 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXN3O00409 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXN3O00409 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
FOXN3O00409 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXN3O00409 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXN3O00409 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXN3O00409 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXN3O00409 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
FOXN3O00409 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.15■□□□□ 0.18
FOXN3O00409 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
FOXN3O00409 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
FOXN3O00409 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXN3O00409 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXN3O00409 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXN3O00409 AL161772.1-201ENST00000610494 4412 ntBASIC16.15■□□□□ 0.18
FOXN3O00409 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXN3O00409 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXN3O00409 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.15■□□□□ 0.18
FOXN3O00409 AL354702.1-201ENST00000442006 1960 ntBASIC16.15■□□□□ 0.18
FOXN3O00409 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.15■□□□□ 0.18
FOXN3O00409 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FOXN3O00409 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.15■□□□□ 0.18
FOXN3O00409 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXN3O00409 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
FOXN3O00409 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXN3O00409 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.15■□□□□ 0.18
FOXN3O00409 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXN3O00409 MSTO2P-201ENST00000314835 1709 ntBASIC16.15■□□□□ 0.18
FOXN3O00409 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.15■□□□□ 0.18
FOXN3O00409 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXN3O00409 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.15■□□□□ 0.18
FOXN3O00409 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
FOXN3O00409 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.15■□□□□ 0.18
FOXN3O00409 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.15■□□□□ 0.18
FOXN3O00409 TERF1P3-201ENST00000505638 1227 ntBASIC16.15■□□□□ 0.18
FOXN3O00409 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXN3O00409 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
FOXN3O00409 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.15■□□□□ 0.18
FOXN3O00409 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FOXN3O00409 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.15■□□□□ 0.18
FOXN3O00409 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
FOXN3O00409 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.15■□□□□ 0.18
FOXN3O00409 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXN3O00409 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
FOXN3O00409 AC004466.1-201ENST00000599515 1080 ntBASIC16.15■□□□□ 0.18
FOXN3O00409 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
FOXN3O00409 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.15■□□□□ 0.18
FOXN3O00409 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FOXN3O00409 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FOXN3O00409 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
FOXN3O00409 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXN3O00409 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.15■□□□□ 0.18
FOXN3O00409 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXN3O00409 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXN3O00409 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms