Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
LINC01546A6NGU7 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 TUBB8P4-201ENST00000511806 1324 ntBASIC10.63□□□□□ -0.71
LINC01546A6NGU7 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 HLA-K-203ENST00000430151 1046 ntBASIC10.63□□□□□ -0.71
LINC01546A6NGU7 KRT18P64-201ENST00000434946 1219 ntBASIC10.63□□□□□ -0.71
LINC01546A6NGU7 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 AL135744.1-201ENST00000565098 629 ntBASIC10.63□□□□□ -0.71
LINC01546A6NGU7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 MIR3652-201ENST00000579335 131 ntBASIC10.63□□□□□ -0.71
LINC01546A6NGU7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 LINC01711-201ENST00000598340 967 ntBASIC10.63□□□□□ -0.71
LINC01546A6NGU7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 AL137783.1-201ENST00000623494 1896 ntBASIC10.63□□□□□ -0.71
LINC01546A6NGU7 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 AL121723.1-201ENST00000445194 1519 ntBASIC10.63□□□□□ -0.71
LINC01546A6NGU7 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01546A6NGU7 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01546A6NGU7 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms