Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 AL136379.1-201ENST00000623471 2642 ntBASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPDC1A2A3K4 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 AL009178.2-201ENST00000597278 2719 ntBASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 AC140479.7-201ENST00000636301 2332 ntBASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 FTH1P14-201ENST00000482930 551 ntBASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPDC1A2A3K4 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.77■□□□□ 0.44
PTPDC1A2A3K4 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.77■□□□□ 0.44
PTPDC1A2A3K4 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PTPDC1A2A3K4 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPDC1A2A3K4 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
PTPDC1A2A3K4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.77■□□□□ 0.44
PTPDC1A2A3K4 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPDC1A2A3K4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PTPDC1A2A3K4 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPDC1A2A3K4 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPDC1A2A3K4 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPDC1A2A3K4 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPDC1A2A3K4 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PTPDC1A2A3K4 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PTPDC1A2A3K4 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
PTPDC1A2A3K4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPDC1A2A3K4 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PTPDC1A2A3K4 AC092933.1-201ENST00000393644 945 ntBASIC17.77■□□□□ 0.44
PTPDC1A2A3K4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.77■□□□□ 0.44
PTPDC1A2A3K4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.77■□□□□ 0.44
PTPDC1A2A3K4 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.77■□□□□ 0.44
PTPDC1A2A3K4 AC007551.1-201ENST00000457394 519 ntBASIC17.77■□□□□ 0.44
PTPDC1A2A3K4 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.77■□□□□ 0.44
PTPDC1A2A3K4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.77■□□□□ 0.44
PTPDC1A2A3K4 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.77■□□□□ 0.44
PTPDC1A2A3K4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.77■□□□□ 0.44
PTPDC1A2A3K4 AL033527.4-201ENST00000641026 673 ntBASIC17.77■□□□□ 0.44
PTPDC1A2A3K4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.77■□□□□ 0.44
PTPDC1A2A3K4 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPDC1A2A3K4 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPDC1A2A3K4 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
PTPDC1A2A3K4 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTPDC1A2A3K4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PTPDC1A2A3K4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
PTPDC1A2A3K4 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.77■□□□□ 0.43
PTPDC1A2A3K4 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
PTPDC1A2A3K4 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTPDC1A2A3K4 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
PTPDC1A2A3K4 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
PTPDC1A2A3K4 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms