Protein–RNA interactions for Protein: Q9Y6H6

KCNE3, Potassium voltage-gated channel subfamily E member 3, humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNE3Q9Y6H6 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
KCNE3Q9Y6H6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.41■■□□□ 1.02
KCNE3Q9Y6H6 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
KCNE3Q9Y6H6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KCNE3Q9Y6H6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.4■■□□□ 1.02
KCNE3Q9Y6H6 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KCNE3Q9Y6H6 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.4■■□□□ 1.02
KCNE3Q9Y6H6 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
KCNE3Q9Y6H6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
KCNE3Q9Y6H6 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.39■■□□□ 1.02
KCNE3Q9Y6H6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
KCNE3Q9Y6H6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
KCNE3Q9Y6H6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.02
KCNE3Q9Y6H6 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
KCNE3Q9Y6H6 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
KCNE3Q9Y6H6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
KCNE3Q9Y6H6 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.39■■□□□ 1.01
KCNE3Q9Y6H6 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
KCNE3Q9Y6H6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
KCNE3Q9Y6H6 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
KCNE3Q9Y6H6 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
KCNE3Q9Y6H6 KRT8P33-201ENST00000508125 1423 ntBASIC21.38■■□□□ 1.01
KCNE3Q9Y6H6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
KCNE3Q9Y6H6 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
KCNE3Q9Y6H6 KRT18P24-201ENST00000344739 1156 ntBASIC21.38■■□□□ 1.01
KCNE3Q9Y6H6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.38■■□□□ 1.01
KCNE3Q9Y6H6 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.38■■□□□ 1.01
KCNE3Q9Y6H6 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
KCNE3Q9Y6H6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.38■■□□□ 1.01
KCNE3Q9Y6H6 AC131274.2-201ENST00000580697 1507 ntBASIC21.38■■□□□ 1.01
KCNE3Q9Y6H6 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
KCNE3Q9Y6H6 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
KCNE3Q9Y6H6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
KCNE3Q9Y6H6 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KCNE3Q9Y6H6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KCNE3Q9Y6H6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.37■■□□□ 1.01
KCNE3Q9Y6H6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
KCNE3Q9Y6H6 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
KCNE3Q9Y6H6 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.37■■□□□ 1.01
KCNE3Q9Y6H6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.37■■□□□ 1.01
KCNE3Q9Y6H6 MIR4508-201ENST00000584178 70 ntBASIC21.37■■□□□ 1.01
KCNE3Q9Y6H6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
KCNE3Q9Y6H6 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KCNE3Q9Y6H6 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
KCNE3Q9Y6H6 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
KCNE3Q9Y6H6 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KCNE3Q9Y6H6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KCNE3Q9Y6H6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KCNE3Q9Y6H6 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNE3Q9Y6H6 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
KCNE3Q9Y6H6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNE3Q9Y6H6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KCNE3Q9Y6H6 THA1P-201ENST00000590384 1145 ntBASIC21.36■■□□□ 1.01
KCNE3Q9Y6H6 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNE3Q9Y6H6 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
KCNE3Q9Y6H6 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNE3Q9Y6H6 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.36■■□□□ 1.01
KCNE3Q9Y6H6 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNE3Q9Y6H6 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
KCNE3Q9Y6H6 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.35■■□□□ 1.01
KCNE3Q9Y6H6 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KCNE3Q9Y6H6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.35■■□□□ 1.01
KCNE3Q9Y6H6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KCNE3Q9Y6H6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KCNE3Q9Y6H6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.35■■□□□ 1.01
KCNE3Q9Y6H6 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
KCNE3Q9Y6H6 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
KCNE3Q9Y6H6 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.35■■□□□ 1.01
KCNE3Q9Y6H6 MIR4281-201ENST00000580852 62 ntBASIC21.35■■□□□ 1.01
KCNE3Q9Y6H6 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KCNE3Q9Y6H6 AF131216.4-201ENST00000638924 1588 ntBASIC21.35■■□□□ 1.01
KCNE3Q9Y6H6 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
KCNE3Q9Y6H6 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
KCNE3Q9Y6H6 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
KCNE3Q9Y6H6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.34■■□□□ 1.01
KCNE3Q9Y6H6 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KCNE3Q9Y6H6 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
KCNE3Q9Y6H6 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.34■■□□□ 1.01
KCNE3Q9Y6H6 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
KCNE3Q9Y6H6 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.34■■□□□ 1.01
KCNE3Q9Y6H6 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KCNE3Q9Y6H6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
KCNE3Q9Y6H6 AL022069.1-201ENST00000568025 1636 ntBASIC21.33■■□□□ 1.01
KCNE3Q9Y6H6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
KCNE3Q9Y6H6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.33■■□□□ 1
KCNE3Q9Y6H6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.33■■□□□ 1
KCNE3Q9Y6H6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KCNE3Q9Y6H6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
KCNE3Q9Y6H6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.32■■□□□ 1
KCNE3Q9Y6H6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.32■■□□□ 1
KCNE3Q9Y6H6 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.32■■□□□ 1
KCNE3Q9Y6H6 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.32■■□□□ 1
KCNE3Q9Y6H6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
KCNE3Q9Y6H6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
KCNE3Q9Y6H6 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.32■■□□□ 1
KCNE3Q9Y6H6 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KCNE3Q9Y6H6 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.32■■□□□ 1
KCNE3Q9Y6H6 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KCNE3Q9Y6H6 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KCNE3Q9Y6H6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms