Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SNCAIPQ9Y6H5 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC27.05■■□□□ 1.92
SNCAIPQ9Y6H5 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC27.05■■□□□ 1.92
SNCAIPQ9Y6H5 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC27.05■■□□□ 1.92
SNCAIPQ9Y6H5 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SNCAIPQ9Y6H5 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
SNCAIPQ9Y6H5 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
SNCAIPQ9Y6H5 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
SNCAIPQ9Y6H5 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC27.04■■□□□ 1.92
SNCAIPQ9Y6H5 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
SNCAIPQ9Y6H5 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC27.04■■□□□ 1.92
SNCAIPQ9Y6H5 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
SNCAIPQ9Y6H5 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC27.04■■□□□ 1.92
SNCAIPQ9Y6H5 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
SNCAIPQ9Y6H5 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC27.03■■□□□ 1.92
SNCAIPQ9Y6H5 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC27.03■■□□□ 1.92
SNCAIPQ9Y6H5 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC27.03■■□□□ 1.92
SNCAIPQ9Y6H5 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
SNCAIPQ9Y6H5 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC27.03■■□□□ 1.92
SNCAIPQ9Y6H5 AC009102.2-201ENST00000606772 1639 ntBASIC27.03■■□□□ 1.92
SNCAIPQ9Y6H5 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
SNCAIPQ9Y6H5 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
SNCAIPQ9Y6H5 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC27.02■■□□□ 1.92
SNCAIPQ9Y6H5 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC27.02■■□□□ 1.92
SNCAIPQ9Y6H5 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC27.02■■□□□ 1.92
SNCAIPQ9Y6H5 AC008764.7-201ENST00000593779 1081 ntBASIC27.02■■□□□ 1.92
SNCAIPQ9Y6H5 AL138724.1-201ENST00000606771 1088 ntBASIC27.02■■□□□ 1.92
SNCAIPQ9Y6H5 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
SNCAIPQ9Y6H5 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
SNCAIPQ9Y6H5 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC27.01■■□□□ 1.91
SNCAIPQ9Y6H5 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
SNCAIPQ9Y6H5 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
SNCAIPQ9Y6H5 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC27.01■■□□□ 1.91
SNCAIPQ9Y6H5 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
SNCAIPQ9Y6H5 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC27.01■■□□□ 1.91
SNCAIPQ9Y6H5 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC27■■□□□ 1.91
SNCAIPQ9Y6H5 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC27■■□□□ 1.91
SNCAIPQ9Y6H5 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC27■■□□□ 1.91
SNCAIPQ9Y6H5 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SNCAIPQ9Y6H5 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.99■■□□□ 1.91
SNCAIPQ9Y6H5 AC099791.1-201ENST00000416440 715 ntBASIC26.99■■□□□ 1.91
SNCAIPQ9Y6H5 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC26.99■■□□□ 1.91
SNCAIPQ9Y6H5 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
SNCAIPQ9Y6H5 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
SNCAIPQ9Y6H5 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.98■■□□□ 1.91
SNCAIPQ9Y6H5 IRS3P-201ENST00000223076 1006 ntBASIC26.98■■□□□ 1.91
SNCAIPQ9Y6H5 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
SNCAIPQ9Y6H5 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
SNCAIPQ9Y6H5 STK32C-205ENST00000456004 607 ntTSL 2 BASIC26.98■■□□□ 1.91
SNCAIPQ9Y6H5 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC26.98■■□□□ 1.91
SNCAIPQ9Y6H5 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.98■■□□□ 1.91
SNCAIPQ9Y6H5 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
SNCAIPQ9Y6H5 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
SNCAIPQ9Y6H5 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SNCAIPQ9Y6H5 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
SNCAIPQ9Y6H5 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SNCAIPQ9Y6H5 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.96■■□□□ 1.91
SNCAIPQ9Y6H5 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SNCAIPQ9Y6H5 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SNCAIPQ9Y6H5 JTB-203ENST00000368589 1216 ntTSL 2 BASIC26.96■■□□□ 1.91
SNCAIPQ9Y6H5 GLI3-203ENST00000437480 451 ntTSL 2 BASIC26.96■■□□□ 1.91
SNCAIPQ9Y6H5 RHOF-204ENST00000537265 699 ntTSL 2 BASIC26.96■■□□□ 1.91
SNCAIPQ9Y6H5 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC26.96■■□□□ 1.91
SNCAIPQ9Y6H5 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SNCAIPQ9Y6H5 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SNCAIPQ9Y6H5 C17orf82-201ENST00000623772 1530 ntBASIC26.95■■□□□ 1.91
SNCAIPQ9Y6H5 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
SNCAIPQ9Y6H5 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
SNCAIPQ9Y6H5 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
SNCAIPQ9Y6H5 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC26.95■■□□□ 1.9
SNCAIPQ9Y6H5 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC26.95■■□□□ 1.9
SNCAIPQ9Y6H5 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.9
SNCAIPQ9Y6H5 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
SNCAIPQ9Y6H5 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SNCAIPQ9Y6H5 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
SNCAIPQ9Y6H5 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
SNCAIPQ9Y6H5 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
SNCAIPQ9Y6H5 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC26.94■■□□□ 1.9
SNCAIPQ9Y6H5 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC26.94■■□□□ 1.9
SNCAIPQ9Y6H5 AC136469.2-201ENST00000623944 1028 ntBASIC26.94■■□□□ 1.9
SNCAIPQ9Y6H5 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
SNCAIPQ9Y6H5 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
SNCAIPQ9Y6H5 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SNCAIPQ9Y6H5 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.93■■□□□ 1.9
SNCAIPQ9Y6H5 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
SNCAIPQ9Y6H5 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC26.93■■□□□ 1.9
SNCAIPQ9Y6H5 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
SNCAIPQ9Y6H5 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC26.93■■□□□ 1.9
SNCAIPQ9Y6H5 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
SNCAIPQ9Y6H5 HES6-206ENST00000409574 738 ntTSL 2 BASIC26.93■■□□□ 1.9
SNCAIPQ9Y6H5 AC006455.2-201ENST00000429931 906 ntBASIC26.93■■□□□ 1.9
SNCAIPQ9Y6H5 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC26.93■■□□□ 1.9
SNCAIPQ9Y6H5 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SNCAIPQ9Y6H5 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
SNCAIPQ9Y6H5 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC26.93■■□□□ 1.9
SNCAIPQ9Y6H5 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SNCAIPQ9Y6H5 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SNCAIPQ9Y6H5 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SNCAIPQ9Y6H5 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC26.92■■□□□ 1.9
SNCAIPQ9Y6H5 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms