Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.97■■□□□ 1.75
KDM3AQ9Y4C1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
KDM3AQ9Y4C1 AC008406.3-201ENST00000620001 1374 ntBASIC25.96■■□□□ 1.75
KDM3AQ9Y4C1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.75
KDM3AQ9Y4C1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
KDM3AQ9Y4C1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.95■■□□□ 1.75
KDM3AQ9Y4C1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC25.95■■□□□ 1.75
KDM3AQ9Y4C1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.75
KDM3AQ9Y4C1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.95■■□□□ 1.75
KDM3AQ9Y4C1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
KDM3AQ9Y4C1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.75
KDM3AQ9Y4C1 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
KDM3AQ9Y4C1 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
KDM3AQ9Y4C1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
KDM3AQ9Y4C1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
KDM3AQ9Y4C1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.94■■□□□ 1.74
KDM3AQ9Y4C1 AC135731.1-201ENST00000569415 2548 ntBASIC25.94■■□□□ 1.74
KDM3AQ9Y4C1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
KDM3AQ9Y4C1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
KDM3AQ9Y4C1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
KDM3AQ9Y4C1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
KDM3AQ9Y4C1 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC25.94■■□□□ 1.74
KDM3AQ9Y4C1 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
KDM3AQ9Y4C1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.94■■□□□ 1.74
KDM3AQ9Y4C1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
KDM3AQ9Y4C1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
KDM3AQ9Y4C1 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
KDM3AQ9Y4C1 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC25.93■■□□□ 1.74
KDM3AQ9Y4C1 AF131216.4-201ENST00000638924 1588 ntBASIC25.93■■□□□ 1.74
KDM3AQ9Y4C1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
KDM3AQ9Y4C1 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.93■■□□□ 1.74
KDM3AQ9Y4C1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
KDM3AQ9Y4C1 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
KDM3AQ9Y4C1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
KDM3AQ9Y4C1 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
KDM3AQ9Y4C1 AL161729.1-201ENST00000604104 1402 ntBASIC25.92■■□□□ 1.74
KDM3AQ9Y4C1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.92■■□□□ 1.74
KDM3AQ9Y4C1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.92■■□□□ 1.74
KDM3AQ9Y4C1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
KDM3AQ9Y4C1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.92■■□□□ 1.74
KDM3AQ9Y4C1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
KDM3AQ9Y4C1 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
KDM3AQ9Y4C1 AC093323.1-202ENST00000635031 2045 ntBASIC25.92■■□□□ 1.74
KDM3AQ9Y4C1 AC019069.1-201ENST00000610008 1333 ntBASIC25.92■■□□□ 1.74
KDM3AQ9Y4C1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.92■■□□□ 1.74
KDM3AQ9Y4C1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.92■■□□□ 1.74
KDM3AQ9Y4C1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.91■■□□□ 1.74
KDM3AQ9Y4C1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
KDM3AQ9Y4C1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
KDM3AQ9Y4C1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.91■■□□□ 1.74
KDM3AQ9Y4C1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
KDM3AQ9Y4C1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.9■■□□□ 1.74
KDM3AQ9Y4C1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.9■■□□□ 1.74
KDM3AQ9Y4C1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
KDM3AQ9Y4C1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.9■■□□□ 1.74
KDM3AQ9Y4C1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
KDM3AQ9Y4C1 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
KDM3AQ9Y4C1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
KDM3AQ9Y4C1 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
KDM3AQ9Y4C1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.89■■□□□ 1.74
KDM3AQ9Y4C1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.89■■□□□ 1.74
KDM3AQ9Y4C1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.89■■□□□ 1.74
KDM3AQ9Y4C1 AC010997.5-201ENST00000609182 354 ntBASIC25.89■■□□□ 1.74
KDM3AQ9Y4C1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.89■■□□□ 1.74
KDM3AQ9Y4C1 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.89■■□□□ 1.74
KDM3AQ9Y4C1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
KDM3AQ9Y4C1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.89■■□□□ 1.74
KDM3AQ9Y4C1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
KDM3AQ9Y4C1 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.73
KDM3AQ9Y4C1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.89■■□□□ 1.73
KDM3AQ9Y4C1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
KDM3AQ9Y4C1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
KDM3AQ9Y4C1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.88■■□□□ 1.73
KDM3AQ9Y4C1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.88■■□□□ 1.73
KDM3AQ9Y4C1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.88■■□□□ 1.73
KDM3AQ9Y4C1 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
KDM3AQ9Y4C1 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
KDM3AQ9Y4C1 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.88■■□□□ 1.73
KDM3AQ9Y4C1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.87■■□□□ 1.73
KDM3AQ9Y4C1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
KDM3AQ9Y4C1 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
KDM3AQ9Y4C1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
KDM3AQ9Y4C1 AL022069.1-201ENST00000568025 1636 ntBASIC25.87■■□□□ 1.73
KDM3AQ9Y4C1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
KDM3AQ9Y4C1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
KDM3AQ9Y4C1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
KDM3AQ9Y4C1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
KDM3AQ9Y4C1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25.86■■□□□ 1.73
KDM3AQ9Y4C1 MTDHP2-201ENST00000601468 714 ntBASIC25.86■■□□□ 1.73
KDM3AQ9Y4C1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.86■■□□□ 1.73
KDM3AQ9Y4C1 MIR6724-1-201ENST00000616420 92 ntBASIC25.86■■□□□ 1.73
KDM3AQ9Y4C1 MIR6724-2-201ENST00000616483 92 ntBASIC25.86■■□□□ 1.73
KDM3AQ9Y4C1 MIR6724-4-201ENST00000617390 92 ntBASIC25.86■■□□□ 1.73
KDM3AQ9Y4C1 MIR6724-3-201ENST00000622482 92 ntBASIC25.86■■□□□ 1.73
KDM3AQ9Y4C1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
KDM3AQ9Y4C1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
KDM3AQ9Y4C1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC25.85■■□□□ 1.73
KDM3AQ9Y4C1 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
KDM3AQ9Y4C1 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
KDM3AQ9Y4C1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms