Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC35.93■■■■□ 3.34
CDK11AQ9UQ88 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC35.93■■■■□ 3.34
CDK11AQ9UQ88 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC35.93■■■■□ 3.34
CDK11AQ9UQ88 RASA4CP-201ENST00000424092 1398 ntBASIC35.92■■■■□ 3.34
CDK11AQ9UQ88 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
CDK11AQ9UQ88 AC011298.3-201ENST00000615796 283 ntBASIC35.92■■■■□ 3.34
CDK11AQ9UQ88 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC35.92■■■■□ 3.34
CDK11AQ9UQ88 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
CDK11AQ9UQ88 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC35.91■■■■□ 3.34
CDK11AQ9UQ88 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC35.91■■■■□ 3.34
CDK11AQ9UQ88 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC35.91■■■■□ 3.34
CDK11AQ9UQ88 AC099791.2-201ENST00000605725 427 ntBASIC35.91■■■■□ 3.34
CDK11AQ9UQ88 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC35.91■■■■□ 3.34
CDK11AQ9UQ88 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC35.9■■■■□ 3.34
CDK11AQ9UQ88 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC35.9■■■■□ 3.34
CDK11AQ9UQ88 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
CDK11AQ9UQ88 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC35.9■■■■□ 3.34
CDK11AQ9UQ88 MIR6821-201ENST00000617625 74 ntBASIC35.9■■■■□ 3.34
CDK11AQ9UQ88 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
CDK11AQ9UQ88 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC35.9■■■■□ 3.34
CDK11AQ9UQ88 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
CDK11AQ9UQ88 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC35.9■■■■□ 3.34
CDK11AQ9UQ88 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC35.89■■■■□ 3.34
CDK11AQ9UQ88 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
CDK11AQ9UQ88 PTCHD3P2-201ENST00000424937 1205 ntBASIC35.89■■■■□ 3.34
CDK11AQ9UQ88 CA15P2-201ENST00000611168 834 ntBASIC35.89■■■■□ 3.34
CDK11AQ9UQ88 MIR6089-201ENST00000616698 64 ntBASIC35.89■■■■□ 3.34
CDK11AQ9UQ88 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
CDK11AQ9UQ88 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
CDK11AQ9UQ88 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
CDK11AQ9UQ88 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC35.89■■■■□ 3.34
CDK11AQ9UQ88 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC35.88■■■■□ 3.34
CDK11AQ9UQ88 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC35.88■■■■□ 3.33
CDK11AQ9UQ88 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC35.88■■■■□ 3.33
CDK11AQ9UQ88 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC35.88■■■■□ 3.33
CDK11AQ9UQ88 STOX2-205ENST00000513034 807 ntTSL 3 BASIC35.88■■■■□ 3.33
CDK11AQ9UQ88 AC027682.1-201ENST00000562846 899 ntBASIC35.88■■■■□ 3.33
CDK11AQ9UQ88 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC35.88■■■■□ 3.33
CDK11AQ9UQ88 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
CDK11AQ9UQ88 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
CDK11AQ9UQ88 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC35.87■■■■□ 3.33
CDK11AQ9UQ88 AC009102.2-201ENST00000606772 1639 ntBASIC35.87■■■■□ 3.33
CDK11AQ9UQ88 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC35.87■■■■□ 3.33
CDK11AQ9UQ88 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC35.87■■■■□ 3.33
CDK11AQ9UQ88 SLC6A10P-202ENST00000431994 2058 ntBASIC35.87■■■■□ 3.33
CDK11AQ9UQ88 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC35.86■■■■□ 3.33
CDK11AQ9UQ88 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
CDK11AQ9UQ88 MAG-206ENST00000597035 542 ntTSL 4 BASIC35.86■■■■□ 3.33
CDK11AQ9UQ88 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC35.86■■■■□ 3.33
CDK11AQ9UQ88 AC097381.1-201ENST00000429019 1296 ntBASIC35.85■■■■□ 3.33
CDK11AQ9UQ88 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC35.85■■■■□ 3.33
CDK11AQ9UQ88 AL022069.1-201ENST00000568025 1636 ntBASIC35.85■■■■□ 3.33
CDK11AQ9UQ88 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC35.85■■■■□ 3.33
CDK11AQ9UQ88 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC35.84■■■■□ 3.33
CDK11AQ9UQ88 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
CDK11AQ9UQ88 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC35.84■■■■□ 3.33
CDK11AQ9UQ88 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC35.83■■■■□ 3.33
CDK11AQ9UQ88 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC35.83■■■■□ 3.33
CDK11AQ9UQ88 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC35.83■■■■□ 3.33
CDK11AQ9UQ88 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
CDK11AQ9UQ88 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.32
CDK11AQ9UQ88 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC35.82■■■■□ 3.32
CDK11AQ9UQ88 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC35.82■■■■□ 3.32
CDK11AQ9UQ88 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC35.82■■■■□ 3.32
CDK11AQ9UQ88 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC35.82■■■■□ 3.32
CDK11AQ9UQ88 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC35.82■■■■□ 3.32
CDK11AQ9UQ88 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC35.82■■■■□ 3.32
CDK11AQ9UQ88 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC35.82■■■■□ 3.32
CDK11AQ9UQ88 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC35.81■■■■□ 3.32
CDK11AQ9UQ88 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC35.81■■■■□ 3.32
CDK11AQ9UQ88 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC35.81■■■■□ 3.32
CDK11AQ9UQ88 C17orf82-201ENST00000623772 1530 ntBASIC35.8■■■■□ 3.32
CDK11AQ9UQ88 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC35.8■■■■□ 3.32
CDK11AQ9UQ88 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC35.8■■■■□ 3.32
CDK11AQ9UQ88 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC35.8■■■■□ 3.32
CDK11AQ9UQ88 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC35.8■■■■□ 3.32
CDK11AQ9UQ88 AC241377.3-202ENST00000626088 1088 ntBASIC35.8■■■■□ 3.32
CDK11AQ9UQ88 AC241585.3-202ENST00000628937 1088 ntBASIC35.8■■■■□ 3.32
CDK11AQ9UQ88 AC245100.8-202ENST00000629247 1058 ntBASIC35.8■■■■□ 3.32
CDK11AQ9UQ88 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
CDK11AQ9UQ88 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC35.8■■■■□ 3.32
CDK11AQ9UQ88 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC35.79■■■■□ 3.32
CDK11AQ9UQ88 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC35.79■■■■□ 3.32
CDK11AQ9UQ88 ANKRD20A6P-201ENST00000618763 204 ntBASIC35.79■■■■□ 3.32
CDK11AQ9UQ88 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
CDK11AQ9UQ88 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
CDK11AQ9UQ88 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC35.78■■■■□ 3.32
CDK11AQ9UQ88 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC35.77■■■■□ 3.32
CDK11AQ9UQ88 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC35.77■■■■□ 3.32
CDK11AQ9UQ88 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC35.77■■■■□ 3.32
CDK11AQ9UQ88 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
CDK11AQ9UQ88 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC35.76■■■■□ 3.32
CDK11AQ9UQ88 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.31
CDK11AQ9UQ88 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC35.75■■■■□ 3.31
CDK11AQ9UQ88 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
CDK11AQ9UQ88 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC35.75■■■■□ 3.31
CDK11AQ9UQ88 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC35.75■■■■□ 3.31
CDK11AQ9UQ88 AC136469.2-201ENST00000623944 1028 ntBASIC35.75■■■■□ 3.31
CDK11AQ9UQ88 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
CDK11AQ9UQ88 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms