Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
PCDHA6Q9UN73 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
PCDHA6Q9UN73 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.45■■□□□ 1.82
PCDHA6Q9UN73 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC26.45■■□□□ 1.82
PCDHA6Q9UN73 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
PCDHA6Q9UN73 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
PCDHA6Q9UN73 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PCDHA6Q9UN73 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC26.44■■□□□ 1.82
PCDHA6Q9UN73 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.44■■□□□ 1.82
PCDHA6Q9UN73 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
PCDHA6Q9UN73 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
PCDHA6Q9UN73 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
PCDHA6Q9UN73 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
PCDHA6Q9UN73 KRT16P3-201ENST00000439127 1283 ntBASIC26.44■■□□□ 1.82
PCDHA6Q9UN73 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
PCDHA6Q9UN73 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.44■■□□□ 1.82
PCDHA6Q9UN73 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC26.44■■□□□ 1.82
PCDHA6Q9UN73 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.44■■□□□ 1.82
PCDHA6Q9UN73 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
PCDHA6Q9UN73 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
PCDHA6Q9UN73 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC26.43■■□□□ 1.82
PCDHA6Q9UN73 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PCDHA6Q9UN73 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
PCDHA6Q9UN73 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC26.43■■□□□ 1.82
PCDHA6Q9UN73 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
PCDHA6Q9UN73 SNX5-217ENST00000606557 1087 ntBASIC26.43■■□□□ 1.82
PCDHA6Q9UN73 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PCDHA6Q9UN73 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.43■■□□□ 1.82
PCDHA6Q9UN73 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC26.43■■□□□ 1.82
PCDHA6Q9UN73 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.42■■□□□ 1.82
PCDHA6Q9UN73 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
PCDHA6Q9UN73 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
PCDHA6Q9UN73 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
PCDHA6Q9UN73 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PCDHA6Q9UN73 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC26.41■■□□□ 1.82
PCDHA6Q9UN73 AC010997.5-201ENST00000609182 354 ntBASIC26.41■■□□□ 1.82
PCDHA6Q9UN73 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PCDHA6Q9UN73 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PCDHA6Q9UN73 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PCDHA6Q9UN73 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
PCDHA6Q9UN73 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
PCDHA6Q9UN73 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
PCDHA6Q9UN73 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.4■■□□□ 1.82
PCDHA6Q9UN73 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PCDHA6Q9UN73 MTDHP2-201ENST00000601468 714 ntBASIC26.4■■□□□ 1.82
PCDHA6Q9UN73 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PCDHA6Q9UN73 AC141586.4-201ENST00000624558 1573 ntBASIC26.4■■□□□ 1.82
PCDHA6Q9UN73 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
PCDHA6Q9UN73 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
PCDHA6Q9UN73 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PCDHA6Q9UN73 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC26.38■■□□□ 1.81
PCDHA6Q9UN73 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC26.38■■□□□ 1.81
PCDHA6Q9UN73 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PCDHA6Q9UN73 AC131212.1-201ENST00000613771 668 ntBASIC26.38■■□□□ 1.81
PCDHA6Q9UN73 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
PCDHA6Q9UN73 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PCDHA6Q9UN73 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHA6Q9UN73 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHA6Q9UN73 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHA6Q9UN73 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHA6Q9UN73 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.37■■□□□ 1.81
PCDHA6Q9UN73 AC004448.1-201ENST00000458332 883 ntBASIC26.37■■□□□ 1.81
PCDHA6Q9UN73 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.37■■□□□ 1.81
PCDHA6Q9UN73 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHA6Q9UN73 CD37-213ENST00000598095 1598 ntTSL 2 BASIC26.37■■□□□ 1.81
PCDHA6Q9UN73 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHA6Q9UN73 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHA6Q9UN73 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC26.36■■□□□ 1.81
PCDHA6Q9UN73 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHA6Q9UN73 AL022069.1-201ENST00000568025 1636 ntBASIC26.36■■□□□ 1.81
PCDHA6Q9UN73 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.36■■□□□ 1.81
PCDHA6Q9UN73 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHA6Q9UN73 LSM7-203ENST00000585409 512 ntTSL 2 BASIC26.36■■□□□ 1.81
PCDHA6Q9UN73 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.36■■□□□ 1.81
PCDHA6Q9UN73 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
PCDHA6Q9UN73 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC26.36■■□□□ 1.81
PCDHA6Q9UN73 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
PCDHA6Q9UN73 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHA6Q9UN73 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC26.35■■□□□ 1.81
PCDHA6Q9UN73 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHA6Q9UN73 AC004812.2-201ENST00000611079 2094 ntBASIC26.35■■□□□ 1.81
PCDHA6Q9UN73 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC26.35■■□□□ 1.81
PCDHA6Q9UN73 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
PCDHA6Q9UN73 AC093323.1-202ENST00000635031 2045 ntBASIC26.34■■□□□ 1.81
PCDHA6Q9UN73 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHA6Q9UN73 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHA6Q9UN73 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHA6Q9UN73 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC26.34■■□□□ 1.81
PCDHA6Q9UN73 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.34■■□□□ 1.81
PCDHA6Q9UN73 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.34■■□□□ 1.81
PCDHA6Q9UN73 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHA6Q9UN73 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC26.33■■□□□ 1.81
PCDHA6Q9UN73 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHA6Q9UN73 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHA6Q9UN73 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHA6Q9UN73 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHA6Q9UN73 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.33■■□□□ 1.81
PCDHA6Q9UN73 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHA6Q9UN73 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHA6Q9UN73 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms