Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC44.09■■■■■ 4.65
SHROOM4Q9ULL8 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC44.08■■■■■ 4.65
SHROOM4Q9ULL8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC44.08■■■■■ 4.65
SHROOM4Q9ULL8 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC44.08■■■■■ 4.65
SHROOM4Q9ULL8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC44.08■■■■■ 4.65
SHROOM4Q9ULL8 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC44.08■■■■■ 4.65
SHROOM4Q9ULL8 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC44.08■■■■■ 4.65
SHROOM4Q9ULL8 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC44.08■■■■■ 4.65
SHROOM4Q9ULL8 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC44.08■■■■■ 4.65
SHROOM4Q9ULL8 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC44.08■■■■■ 4.65
SHROOM4Q9ULL8 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC44.07■■■■■ 4.65
SHROOM4Q9ULL8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC44.07■■■■■ 4.65
SHROOM4Q9ULL8 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC44.07■■■■■ 4.65
SHROOM4Q9ULL8 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC44.06■■■■■ 4.64
SHROOM4Q9ULL8 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC44.06■■■■■ 4.64
SHROOM4Q9ULL8 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC44.06■■■■■ 4.64
SHROOM4Q9ULL8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC44.05■■■■■ 4.64
SHROOM4Q9ULL8 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC44.05■■■■■ 4.64
SHROOM4Q9ULL8 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC44.05■■■■■ 4.64
SHROOM4Q9ULL8 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC44.05■■■■■ 4.64
SHROOM4Q9ULL8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC44.04■■■■■ 4.64
SHROOM4Q9ULL8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC44.04■■■■■ 4.64
SHROOM4Q9ULL8 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC44.04■■■■■ 4.64
SHROOM4Q9ULL8 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC44.04■■■■■ 4.64
SHROOM4Q9ULL8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC44.04■■■■■ 4.64
SHROOM4Q9ULL8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC44.04■■■■■ 4.64
SHROOM4Q9ULL8 MAG-206ENST00000597035 542 ntTSL 4 BASIC44.04■■■■■ 4.64
SHROOM4Q9ULL8 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC44.03■■■■■ 4.64
SHROOM4Q9ULL8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC44.03■■■■■ 4.64
SHROOM4Q9ULL8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC44.03■■■■■ 4.64
SHROOM4Q9ULL8 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC44.03■■■■■ 4.64
SHROOM4Q9ULL8 AC011298.3-201ENST00000615796 283 ntBASIC44.03■■■■■ 4.64
SHROOM4Q9ULL8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC44.03■■■■■ 4.64
SHROOM4Q9ULL8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC44.02■■■■■ 4.64
SHROOM4Q9ULL8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC44.02■■■■■ 4.64
SHROOM4Q9ULL8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC44.02■■■■■ 4.64
SHROOM4Q9ULL8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC44.02■■■■■ 4.64
SHROOM4Q9ULL8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC44.02■■■■■ 4.64
SHROOM4Q9ULL8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC44.02■■■■■ 4.64
SHROOM4Q9ULL8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC44.02■■■■■ 4.64
SHROOM4Q9ULL8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC44.01■■■■■ 4.64
SHROOM4Q9ULL8 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC44.01■■■■■ 4.64
SHROOM4Q9ULL8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC44.01■■■■■ 4.64
SHROOM4Q9ULL8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC44■■■■■ 4.63
SHROOM4Q9ULL8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC44■■■■■ 4.63
SHROOM4Q9ULL8 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC43.99■■■■■ 4.63
SHROOM4Q9ULL8 AC092171.4-201ENST00000609130 632 ntBASIC43.99■■■■■ 4.63
SHROOM4Q9ULL8 AC092437.1-201ENST00000624794 1048 ntBASIC43.99■■■■■ 4.63
SHROOM4Q9ULL8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC43.98■■■■■ 4.63
SHROOM4Q9ULL8 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC43.98■■■■■ 4.63
SHROOM4Q9ULL8 IRS3P-201ENST00000223076 1006 ntBASIC43.98■■■■■ 4.63
SHROOM4Q9ULL8 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC43.98■■■■■ 4.63
SHROOM4Q9ULL8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC43.98■■■■■ 4.63
SHROOM4Q9ULL8 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC43.98■■■■■ 4.63
SHROOM4Q9ULL8 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC43.98■■■■■ 4.63
SHROOM4Q9ULL8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC43.98■■■■■ 4.63
SHROOM4Q9ULL8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC43.97■■■■■ 4.63
SHROOM4Q9ULL8 JTB-203ENST00000368589 1216 ntTSL 2 BASIC43.97■■■■■ 4.63
SHROOM4Q9ULL8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC43.96■■■■■ 4.63
SHROOM4Q9ULL8 IKBKGP1-201ENST00000612193 1073 ntBASIC43.96■■■■■ 4.63
SHROOM4Q9ULL8 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC43.96■■■■■ 4.63
SHROOM4Q9ULL8 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC43.96■■■■■ 4.63
SHROOM4Q9ULL8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC43.96■■■■■ 4.63
SHROOM4Q9ULL8 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC43.96■■■■■ 4.63
SHROOM4Q9ULL8 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC43.96■■■■■ 4.63
SHROOM4Q9ULL8 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC43.96■■■■■ 4.63
SHROOM4Q9ULL8 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC43.95■■■■■ 4.63
SHROOM4Q9ULL8 AC091060.1-201ENST00000623524 1766 ntBASIC43.95■■■■■ 4.63
SHROOM4Q9ULL8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC43.95■■■■■ 4.63
SHROOM4Q9ULL8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC43.95■■■■■ 4.63
SHROOM4Q9ULL8 AL138724.1-201ENST00000606771 1088 ntBASIC43.95■■■■■ 4.63
SHROOM4Q9ULL8 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC43.94■■■■■ 4.63
SHROOM4Q9ULL8 SLC6A10P-202ENST00000431994 2058 ntBASIC43.94■■■■■ 4.62
SHROOM4Q9ULL8 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC43.94■■■■■ 4.62
SHROOM4Q9ULL8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC43.94■■■■■ 4.62
SHROOM4Q9ULL8 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC43.94■■■■■ 4.62
SHROOM4Q9ULL8 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC43.93■■■■■ 4.62
SHROOM4Q9ULL8 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC43.93■■■■■ 4.62
SHROOM4Q9ULL8 AC034268.1-201ENST00000441047 882 ntBASIC43.93■■■■■ 4.62
SHROOM4Q9ULL8 DENND3-207ENST00000518347 850 ntTSL 2 BASIC43.93■■■■■ 4.62
SHROOM4Q9ULL8 RHOF-204ENST00000537265 699 ntTSL 2 BASIC43.93■■■■■ 4.62
SHROOM4Q9ULL8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC43.92■■■■■ 4.62
SHROOM4Q9ULL8 KRT18P5-201ENST00000436075 1291 ntBASIC43.92■■■■■ 4.62
SHROOM4Q9ULL8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC43.92■■■■■ 4.62
SHROOM4Q9ULL8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC43.92■■■■■ 4.62
SHROOM4Q9ULL8 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC43.92■■■■■ 4.62
SHROOM4Q9ULL8 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC43.92■■■■■ 4.62
SHROOM4Q9ULL8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC43.92■■■■■ 4.62
SHROOM4Q9ULL8 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC43.91■■■■■ 4.62
SHROOM4Q9ULL8 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC43.91■■■■■ 4.62
SHROOM4Q9ULL8 DUSP8P4-201ENST00000399538 1761 ntBASIC43.91■■■■■ 4.62
SHROOM4Q9ULL8 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC43.91■■■■■ 4.62
SHROOM4Q9ULL8 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC43.9■■■■■ 4.62
SHROOM4Q9ULL8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC43.9■■■■■ 4.62
SHROOM4Q9ULL8 AL137784.2-201ENST00000607332 1000 ntBASIC43.9■■■■■ 4.62
SHROOM4Q9ULL8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC43.9■■■■■ 4.62
SHROOM4Q9ULL8 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC43.89■■■■■ 4.62
SHROOM4Q9ULL8 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC43.89■■■■■ 4.62
SHROOM4Q9ULL8 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC43.89■■■■■ 4.62
SHROOM4Q9ULL8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC43.89■■■■■ 4.62
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms