Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
DDX41Q9UJV9 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
DDX41Q9UJV9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC26.39■■□□□ 1.82
DDX41Q9UJV9 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
DDX41Q9UJV9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC26.39■■□□□ 1.82
DDX41Q9UJV9 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC26.39■■□□□ 1.82
DDX41Q9UJV9 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.82
DDX41Q9UJV9 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
DDX41Q9UJV9 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.39■■□□□ 1.82
DDX41Q9UJV9 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.39■■□□□ 1.81
DDX41Q9UJV9 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
DDX41Q9UJV9 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
DDX41Q9UJV9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
DDX41Q9UJV9 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
DDX41Q9UJV9 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
DDX41Q9UJV9 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.37■■□□□ 1.81
DDX41Q9UJV9 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
DDX41Q9UJV9 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.37■■□□□ 1.81
DDX41Q9UJV9 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
DDX41Q9UJV9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
DDX41Q9UJV9 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.36■■□□□ 1.81
DDX41Q9UJV9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
DDX41Q9UJV9 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.36■■□□□ 1.81
DDX41Q9UJV9 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.35■■□□□ 1.81
DDX41Q9UJV9 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
DDX41Q9UJV9 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
DDX41Q9UJV9 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
DDX41Q9UJV9 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
DDX41Q9UJV9 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC26.35■■□□□ 1.81
DDX41Q9UJV9 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.35■■□□□ 1.81
DDX41Q9UJV9 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC26.35■■□□□ 1.81
DDX41Q9UJV9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
DDX41Q9UJV9 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC26.35■■□□□ 1.81
DDX41Q9UJV9 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
DDX41Q9UJV9 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
DDX41Q9UJV9 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC26.35■■□□□ 1.81
DDX41Q9UJV9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
DDX41Q9UJV9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
DDX41Q9UJV9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
DDX41Q9UJV9 AL356740.2-201ENST00000601559 647 ntBASIC26.34■■□□□ 1.81
DDX41Q9UJV9 SNX5-217ENST00000606557 1087 ntBASIC26.34■■□□□ 1.81
DDX41Q9UJV9 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
DDX41Q9UJV9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
DDX41Q9UJV9 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
DDX41Q9UJV9 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.33■■□□□ 1.81
DDX41Q9UJV9 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
DDX41Q9UJV9 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
DDX41Q9UJV9 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.33■■□□□ 1.81
DDX41Q9UJV9 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.33■■□□□ 1.81
DDX41Q9UJV9 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
DDX41Q9UJV9 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC26.33■■□□□ 1.8
DDX41Q9UJV9 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
DDX41Q9UJV9 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
DDX41Q9UJV9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
DDX41Q9UJV9 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.32■■□□□ 1.8
DDX41Q9UJV9 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.32■■□□□ 1.8
DDX41Q9UJV9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC26.32■■□□□ 1.8
DDX41Q9UJV9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC26.32■■□□□ 1.8
DDX41Q9UJV9 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
DDX41Q9UJV9 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.32■■□□□ 1.8
DDX41Q9UJV9 LINC00543-201ENST00000567234 1845 ntBASIC26.32■■□□□ 1.8
DDX41Q9UJV9 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
DDX41Q9UJV9 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
DDX41Q9UJV9 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
DDX41Q9UJV9 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
DDX41Q9UJV9 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
DDX41Q9UJV9 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC26.3■■□□□ 1.8
DDX41Q9UJV9 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.3■■□□□ 1.8
DDX41Q9UJV9 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
DDX41Q9UJV9 TMEM202-AS1-202ENST00000565181 2325 ntBASIC26.3■■□□□ 1.8
DDX41Q9UJV9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
DDX41Q9UJV9 AL136116.3-201ENST00000402907 1138 ntBASIC26.3■■□□□ 1.8
DDX41Q9UJV9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.3■■□□□ 1.8
DDX41Q9UJV9 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.3■■□□□ 1.8
DDX41Q9UJV9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
DDX41Q9UJV9 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.3■■□□□ 1.8
DDX41Q9UJV9 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
DDX41Q9UJV9 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
DDX41Q9UJV9 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC26.29■■□□□ 1.8
DDX41Q9UJV9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
DDX41Q9UJV9 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
DDX41Q9UJV9 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.29■■□□□ 1.8
DDX41Q9UJV9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.29■■□□□ 1.8
DDX41Q9UJV9 MIR6722-201ENST00000617286 78 ntBASIC26.29■■□□□ 1.8
DDX41Q9UJV9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
DDX41Q9UJV9 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.29■■□□□ 1.8
DDX41Q9UJV9 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
DDX41Q9UJV9 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC26.29■■□□□ 1.8
DDX41Q9UJV9 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
DDX41Q9UJV9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
DDX41Q9UJV9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.28■■□□□ 1.8
DDX41Q9UJV9 MIR4466-201ENST00000606121 54 ntBASIC26.28■■□□□ 1.8
DDX41Q9UJV9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.28■■□□□ 1.8
DDX41Q9UJV9 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
DDX41Q9UJV9 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
DDX41Q9UJV9 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
DDX41Q9UJV9 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
DDX41Q9UJV9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
DDX41Q9UJV9 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.27■■□□□ 1.8
DDX41Q9UJV9 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms