Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC24.11■■□□□ 1.45
HCFC1R1Q9NWW0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
HCFC1R1Q9NWW0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
HCFC1R1Q9NWW0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
HCFC1R1Q9NWW0 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.11■■□□□ 1.45
HCFC1R1Q9NWW0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
HCFC1R1Q9NWW0 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
HCFC1R1Q9NWW0 AC026271.2-201ENST00000428091 497 ntBASIC24.1■■□□□ 1.45
HCFC1R1Q9NWW0 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC24.1■■□□□ 1.45
HCFC1R1Q9NWW0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC24.1■■□□□ 1.45
HCFC1R1Q9NWW0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC24.1■■□□□ 1.45
HCFC1R1Q9NWW0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
HCFC1R1Q9NWW0 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
HCFC1R1Q9NWW0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.1■■□□□ 1.45
HCFC1R1Q9NWW0 DUSP8P4-201ENST00000399538 1761 ntBASIC24.09■■□□□ 1.45
HCFC1R1Q9NWW0 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.09■■□□□ 1.45
HCFC1R1Q9NWW0 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
HCFC1R1Q9NWW0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC24.09■■□□□ 1.45
HCFC1R1Q9NWW0 AC105265.2-201ENST00000467189 838 ntBASIC24.09■■□□□ 1.45
HCFC1R1Q9NWW0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
HCFC1R1Q9NWW0 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC24.09■■□□□ 1.45
HCFC1R1Q9NWW0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
HCFC1R1Q9NWW0 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
HCFC1R1Q9NWW0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
HCFC1R1Q9NWW0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
HCFC1R1Q9NWW0 MIR6089-201ENST00000616698 64 ntBASIC24.08■■□□□ 1.45
HCFC1R1Q9NWW0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.08■■□□□ 1.45
HCFC1R1Q9NWW0 SYT6-210ENST00000641643 1587 ntBASIC24.08■■□□□ 1.44
HCFC1R1Q9NWW0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC24.07■■□□□ 1.44
HCFC1R1Q9NWW0 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
HCFC1R1Q9NWW0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
HCFC1R1Q9NWW0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
HCFC1R1Q9NWW0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
HCFC1R1Q9NWW0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
HCFC1R1Q9NWW0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
HCFC1R1Q9NWW0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.07■■□□□ 1.44
HCFC1R1Q9NWW0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.07■■□□□ 1.44
HCFC1R1Q9NWW0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
HCFC1R1Q9NWW0 AP001330.3-201ENST00000520123 633 ntBASIC24.07■■□□□ 1.44
HCFC1R1Q9NWW0 DUX4L19-201ENST00000557448 1267 ntBASIC24.07■■□□□ 1.44
HCFC1R1Q9NWW0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
HCFC1R1Q9NWW0 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.06■■□□□ 1.44
HCFC1R1Q9NWW0 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
HCFC1R1Q9NWW0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
HCFC1R1Q9NWW0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
HCFC1R1Q9NWW0 MIR939-201ENST00000401314 82 ntBASIC24.06■■□□□ 1.44
HCFC1R1Q9NWW0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
HCFC1R1Q9NWW0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
HCFC1R1Q9NWW0 MIR4767-201ENST00000582827 78 ntBASIC24.06■■□□□ 1.44
HCFC1R1Q9NWW0 AC099791.2-201ENST00000605725 427 ntBASIC24.06■■□□□ 1.44
HCFC1R1Q9NWW0 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.06■■□□□ 1.44
HCFC1R1Q9NWW0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC24.06■■□□□ 1.44
HCFC1R1Q9NWW0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
HCFC1R1Q9NWW0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.05■■□□□ 1.44
HCFC1R1Q9NWW0 SERBP1P1-201ENST00000396021 1160 ntBASIC24.05■■□□□ 1.44
HCFC1R1Q9NWW0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
HCFC1R1Q9NWW0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC24.05■■□□□ 1.44
HCFC1R1Q9NWW0 SF1-220ENST00000626028 704 ntTSL 2 BASIC24.05■■□□□ 1.44
HCFC1R1Q9NWW0 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
HCFC1R1Q9NWW0 AC091060.1-201ENST00000623524 1766 ntBASIC24.05■■□□□ 1.44
HCFC1R1Q9NWW0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
HCFC1R1Q9NWW0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
HCFC1R1Q9NWW0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
HCFC1R1Q9NWW0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC24.04■■□□□ 1.44
HCFC1R1Q9NWW0 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
HCFC1R1Q9NWW0 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
HCFC1R1Q9NWW0 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
HCFC1R1Q9NWW0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
HCFC1R1Q9NWW0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
HCFC1R1Q9NWW0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC24.03■■□□□ 1.44
HCFC1R1Q9NWW0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
HCFC1R1Q9NWW0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.03■■□□□ 1.44
HCFC1R1Q9NWW0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.03■■□□□ 1.44
HCFC1R1Q9NWW0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.03■■□□□ 1.44
HCFC1R1Q9NWW0 AC009102.2-201ENST00000606772 1639 ntBASIC24.03■■□□□ 1.44
HCFC1R1Q9NWW0 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
HCFC1R1Q9NWW0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
HCFC1R1Q9NWW0 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
HCFC1R1Q9NWW0 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
HCFC1R1Q9NWW0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
HCFC1R1Q9NWW0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC24.03■■□□□ 1.44
HCFC1R1Q9NWW0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
HCFC1R1Q9NWW0 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
HCFC1R1Q9NWW0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
HCFC1R1Q9NWW0 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
HCFC1R1Q9NWW0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC24.02■■□□□ 1.44
HCFC1R1Q9NWW0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24.02■■□□□ 1.44
HCFC1R1Q9NWW0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
HCFC1R1Q9NWW0 AL022069.1-201ENST00000568025 1636 ntBASIC24.02■■□□□ 1.44
HCFC1R1Q9NWW0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC24.01■■□□□ 1.43
HCFC1R1Q9NWW0 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
HCFC1R1Q9NWW0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
HCFC1R1Q9NWW0 MAG-206ENST00000597035 542 ntTSL 4 BASIC24.01■■□□□ 1.43
HCFC1R1Q9NWW0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.01■■□□□ 1.43
HCFC1R1Q9NWW0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
HCFC1R1Q9NWW0 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
HCFC1R1Q9NWW0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
HCFC1R1Q9NWW0 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC24■■□□□ 1.43
HCFC1R1Q9NWW0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24■■□□□ 1.43
HCFC1R1Q9NWW0 PTCHD3P2-201ENST00000424937 1205 ntBASIC24■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms