Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.37■■□□□ 1.01
CDCP1Q9H5V8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.37■■□□□ 1.01
CDCP1Q9H5V8 MIR6722-201ENST00000617286 78 ntBASIC21.37■■□□□ 1.01
CDCP1Q9H5V8 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.37■■□□□ 1.01
CDCP1Q9H5V8 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.37■■□□□ 1.01
CDCP1Q9H5V8 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDCP1Q9H5V8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
CDCP1Q9H5V8 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.37■■□□□ 1.01
CDCP1Q9H5V8 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.37■■□□□ 1.01
CDCP1Q9H5V8 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDCP1Q9H5V8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.36■■□□□ 1.01
CDCP1Q9H5V8 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CDCP1Q9H5V8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.36■■□□□ 1.01
CDCP1Q9H5V8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.36■■□□□ 1.01
CDCP1Q9H5V8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.36■■□□□ 1.01
CDCP1Q9H5V8 MIR3621-201ENST00000580529 85 ntBASIC21.36■■□□□ 1.01
CDCP1Q9H5V8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.36■■□□□ 1.01
CDCP1Q9H5V8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDCP1Q9H5V8 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.36■■□□□ 1.01
CDCP1Q9H5V8 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDCP1Q9H5V8 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.36■■□□□ 1.01
CDCP1Q9H5V8 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDCP1Q9H5V8 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CDCP1Q9H5V8 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDCP1Q9H5V8 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.35■■□□□ 1.01
CDCP1Q9H5V8 AC004448.1-201ENST00000458332 883 ntBASIC21.35■■□□□ 1.01
CDCP1Q9H5V8 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDCP1Q9H5V8 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.34■■□□□ 1.01
CDCP1Q9H5V8 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.34■■□□□ 1.01
CDCP1Q9H5V8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CDCP1Q9H5V8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDCP1Q9H5V8 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.34■■□□□ 1.01
CDCP1Q9H5V8 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDCP1Q9H5V8 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDCP1Q9H5V8 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.34■■□□□ 1.01
CDCP1Q9H5V8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.34■■□□□ 1.01
CDCP1Q9H5V8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.34■■□□□ 1.01
CDCP1Q9H5V8 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDCP1Q9H5V8 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CDCP1Q9H5V8 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.33■■□□□ 1.01
CDCP1Q9H5V8 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CDCP1Q9H5V8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.33■■□□□ 1.01
CDCP1Q9H5V8 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDCP1Q9H5V8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDCP1Q9H5V8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.33■■□□□ 1.01
CDCP1Q9H5V8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.33■■□□□ 1.01
CDCP1Q9H5V8 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CDCP1Q9H5V8 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDCP1Q9H5V8 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
CDCP1Q9H5V8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDCP1Q9H5V8 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDCP1Q9H5V8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CDCP1Q9H5V8 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDCP1Q9H5V8 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDCP1Q9H5V8 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.32■■□□□ 1
CDCP1Q9H5V8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CDCP1Q9H5V8 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDCP1Q9H5V8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CDCP1Q9H5V8 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
CDCP1Q9H5V8 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
CDCP1Q9H5V8 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.32■■□□□ 1
CDCP1Q9H5V8 AC131281.2-201ENST00000520478 145 ntBASIC21.32■■□□□ 1
CDCP1Q9H5V8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.32■■□□□ 1
CDCP1Q9H5V8 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDCP1Q9H5V8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.31■■□□□ 1
CDCP1Q9H5V8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDCP1Q9H5V8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
CDCP1Q9H5V8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDCP1Q9H5V8 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDCP1Q9H5V8 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.31■■□□□ 1
CDCP1Q9H5V8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.31■■□□□ 1
CDCP1Q9H5V8 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CDCP1Q9H5V8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CDCP1Q9H5V8 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDCP1Q9H5V8 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.31■■□□□ 1
CDCP1Q9H5V8 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDCP1Q9H5V8 AC131274.2-201ENST00000580697 1507 ntBASIC21.3■■□□□ 1
CDCP1Q9H5V8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDCP1Q9H5V8 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDCP1Q9H5V8 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDCP1Q9H5V8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDCP1Q9H5V8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDCP1Q9H5V8 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.3■■□□□ 1
CDCP1Q9H5V8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.3■■□□□ 1
CDCP1Q9H5V8 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.3■■□□□ 1
CDCP1Q9H5V8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDCP1Q9H5V8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDCP1Q9H5V8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDCP1Q9H5V8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CDCP1Q9H5V8 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.29■■□□□ 1
CDCP1Q9H5V8 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.29■■□□□ 1
CDCP1Q9H5V8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.29■■□□□ 1
CDCP1Q9H5V8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.29■■□□□ 1
CDCP1Q9H5V8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CDCP1Q9H5V8 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CDCP1Q9H5V8 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDCP1Q9H5V8 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDCP1Q9H5V8 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.28■■□□□ 1
CDCP1Q9H5V8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CDCP1Q9H5V8 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms