Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.56■■□□□ 1.52
SNX25Q9H3E2 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SNX25Q9H3E2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SNX25Q9H3E2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SNX25Q9H3E2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SNX25Q9H3E2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.55■■□□□ 1.52
SNX25Q9H3E2 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC24.55■■□□□ 1.52
SNX25Q9H3E2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.55■■□□□ 1.52
SNX25Q9H3E2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SNX25Q9H3E2 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SNX25Q9H3E2 MIR6724-1-201ENST00000616420 92 ntBASIC24.55■■□□□ 1.52
SNX25Q9H3E2 MIR6724-2-201ENST00000616483 92 ntBASIC24.55■■□□□ 1.52
SNX25Q9H3E2 MIR6724-4-201ENST00000617390 92 ntBASIC24.55■■□□□ 1.52
SNX25Q9H3E2 MIR6724-3-201ENST00000622482 92 ntBASIC24.55■■□□□ 1.52
SNX25Q9H3E2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
SNX25Q9H3E2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC24.54■■□□□ 1.52
SNX25Q9H3E2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SNX25Q9H3E2 EED-207ENST00000528180 1745 ntTSL 5 BASIC24.54■■□□□ 1.52
SNX25Q9H3E2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SNX25Q9H3E2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
SNX25Q9H3E2 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
SNX25Q9H3E2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
SNX25Q9H3E2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
SNX25Q9H3E2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SNX25Q9H3E2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.53■■□□□ 1.52
SNX25Q9H3E2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.53■■□□□ 1.52
SNX25Q9H3E2 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
SNX25Q9H3E2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SNX25Q9H3E2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
SNX25Q9H3E2 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.53■■□□□ 1.52
SNX25Q9H3E2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.53■■□□□ 1.52
SNX25Q9H3E2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SNX25Q9H3E2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.53■■□□□ 1.52
SNX25Q9H3E2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SNX25Q9H3E2 AL161729.1-201ENST00000604104 1402 ntBASIC24.52■■□□□ 1.52
SNX25Q9H3E2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
SNX25Q9H3E2 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SNX25Q9H3E2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
SNX25Q9H3E2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.52■■□□□ 1.52
SNX25Q9H3E2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SNX25Q9H3E2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SNX25Q9H3E2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SNX25Q9H3E2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.52■■□□□ 1.52
SNX25Q9H3E2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.52■■□□□ 1.52
SNX25Q9H3E2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC24.52■■□□□ 1.52
SNX25Q9H3E2 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SNX25Q9H3E2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SNX25Q9H3E2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.52■■□□□ 1.52
SNX25Q9H3E2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.52■■□□□ 1.52
SNX25Q9H3E2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.51■■□□□ 1.51
SNX25Q9H3E2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.51■■□□□ 1.51
SNX25Q9H3E2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.51■■□□□ 1.51
SNX25Q9H3E2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.51■■□□□ 1.51
SNX25Q9H3E2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.51■■□□□ 1.51
SNX25Q9H3E2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
SNX25Q9H3E2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SNX25Q9H3E2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SNX25Q9H3E2 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.5■■□□□ 1.51
SNX25Q9H3E2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.5■■□□□ 1.51
SNX25Q9H3E2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.5■■□□□ 1.51
SNX25Q9H3E2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
SNX25Q9H3E2 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.5■■□□□ 1.51
SNX25Q9H3E2 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
SNX25Q9H3E2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SNX25Q9H3E2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SNX25Q9H3E2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
SNX25Q9H3E2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SNX25Q9H3E2 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.49■■□□□ 1.51
SNX25Q9H3E2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.49■■□□□ 1.51
SNX25Q9H3E2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SNX25Q9H3E2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SNX25Q9H3E2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SNX25Q9H3E2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SNX25Q9H3E2 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SNX25Q9H3E2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
SNX25Q9H3E2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
SNX25Q9H3E2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.48■■□□□ 1.51
SNX25Q9H3E2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
SNX25Q9H3E2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.48■■□□□ 1.51
SNX25Q9H3E2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SNX25Q9H3E2 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SNX25Q9H3E2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.47■■□□□ 1.51
SNX25Q9H3E2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
SNX25Q9H3E2 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.47■■□□□ 1.51
SNX25Q9H3E2 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.47■■□□□ 1.51
SNX25Q9H3E2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SNX25Q9H3E2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.47■■□□□ 1.51
SNX25Q9H3E2 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SNX25Q9H3E2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.47■■□□□ 1.51
SNX25Q9H3E2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.46■■□□□ 1.51
SNX25Q9H3E2 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SNX25Q9H3E2 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC24.46■■□□□ 1.51
SNX25Q9H3E2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.46■■□□□ 1.51
SNX25Q9H3E2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.46■■□□□ 1.51
SNX25Q9H3E2 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
SNX25Q9H3E2 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SNX25Q9H3E2 AK3-203ENST00000447596 705 ntTSL 2 BASIC24.45■■□□□ 1.5
SNX25Q9H3E2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.45■■□□□ 1.5
SNX25Q9H3E2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SNX25Q9H3E2 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 261.2 ms