Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC27.13■■□□□ 1.93
ZKSCAN3Q9BRR0 GRAMD4P7-201ENST00000578182 1232 ntBASIC27.13■■□□□ 1.93
ZKSCAN3Q9BRR0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC27.13■■□□□ 1.93
ZKSCAN3Q9BRR0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC27.13■■□□□ 1.93
ZKSCAN3Q9BRR0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
ZKSCAN3Q9BRR0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
ZKSCAN3Q9BRR0 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC27.12■■□□□ 1.93
ZKSCAN3Q9BRR0 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC27.12■■□□□ 1.93
ZKSCAN3Q9BRR0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
ZKSCAN3Q9BRR0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC27.12■■□□□ 1.93
ZKSCAN3Q9BRR0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC27.12■■□□□ 1.93
ZKSCAN3Q9BRR0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
ZKSCAN3Q9BRR0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
ZKSCAN3Q9BRR0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC27.11■■□□□ 1.93
ZKSCAN3Q9BRR0 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
ZKSCAN3Q9BRR0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
ZKSCAN3Q9BRR0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
ZKSCAN3Q9BRR0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC27.1■■□□□ 1.93
ZKSCAN3Q9BRR0 KRT16P3-201ENST00000439127 1283 ntBASIC27.1■■□□□ 1.93
ZKSCAN3Q9BRR0 AC004448.1-201ENST00000458332 883 ntBASIC27.1■■□□□ 1.93
ZKSCAN3Q9BRR0 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
ZKSCAN3Q9BRR0 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
ZKSCAN3Q9BRR0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC27.09■■□□□ 1.93
ZKSCAN3Q9BRR0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
ZKSCAN3Q9BRR0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC27.09■■□□□ 1.93
ZKSCAN3Q9BRR0 MTDHP2-201ENST00000601468 714 ntBASIC27.09■■□□□ 1.93
ZKSCAN3Q9BRR0 AC010997.5-201ENST00000609182 354 ntBASIC27.09■■□□□ 1.93
ZKSCAN3Q9BRR0 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
ZKSCAN3Q9BRR0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
ZKSCAN3Q9BRR0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
ZKSCAN3Q9BRR0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
ZKSCAN3Q9BRR0 AL022069.1-201ENST00000568025 1636 ntBASIC27.08■■□□□ 1.93
ZKSCAN3Q9BRR0 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
ZKSCAN3Q9BRR0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
ZKSCAN3Q9BRR0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
ZKSCAN3Q9BRR0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC27.08■■□□□ 1.93
ZKSCAN3Q9BRR0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
ZKSCAN3Q9BRR0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC27.08■■□□□ 1.93
ZKSCAN3Q9BRR0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
ZKSCAN3Q9BRR0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
ZKSCAN3Q9BRR0 PREB-202ENST00000406567 1910 ntTSL 5 BASIC27.08■■□□□ 1.93
ZKSCAN3Q9BRR0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
ZKSCAN3Q9BRR0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
ZKSCAN3Q9BRR0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC27.07■■□□□ 1.92
ZKSCAN3Q9BRR0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
ZKSCAN3Q9BRR0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
ZKSCAN3Q9BRR0 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC27.06■■□□□ 1.92
ZKSCAN3Q9BRR0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC27.06■■□□□ 1.92
ZKSCAN3Q9BRR0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
ZKSCAN3Q9BRR0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
ZKSCAN3Q9BRR0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
ZKSCAN3Q9BRR0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC27.06■■□□□ 1.92
ZKSCAN3Q9BRR0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
ZKSCAN3Q9BRR0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC27.06■■□□□ 1.92
ZKSCAN3Q9BRR0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC27.06■■□□□ 1.92
ZKSCAN3Q9BRR0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
ZKSCAN3Q9BRR0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC27.05■■□□□ 1.92
ZKSCAN3Q9BRR0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC27.05■■□□□ 1.92
ZKSCAN3Q9BRR0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC27.05■■□□□ 1.92
ZKSCAN3Q9BRR0 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC27.05■■□□□ 1.92
ZKSCAN3Q9BRR0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
ZKSCAN3Q9BRR0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC27.05■■□□□ 1.92
ZKSCAN3Q9BRR0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC27.05■■□□□ 1.92
ZKSCAN3Q9BRR0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC27.05■■□□□ 1.92
ZKSCAN3Q9BRR0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
ZKSCAN3Q9BRR0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
ZKSCAN3Q9BRR0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
ZKSCAN3Q9BRR0 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
ZKSCAN3Q9BRR0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC27.04■■□□□ 1.92
ZKSCAN3Q9BRR0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
ZKSCAN3Q9BRR0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
ZKSCAN3Q9BRR0 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
ZKSCAN3Q9BRR0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
ZKSCAN3Q9BRR0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC27.03■■□□□ 1.92
ZKSCAN3Q9BRR0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC27.03■■□□□ 1.92
ZKSCAN3Q9BRR0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
ZKSCAN3Q9BRR0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
ZKSCAN3Q9BRR0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
ZKSCAN3Q9BRR0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC27.02■■□□□ 1.92
ZKSCAN3Q9BRR0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
ZKSCAN3Q9BRR0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC27.02■■□□□ 1.92
ZKSCAN3Q9BRR0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
ZKSCAN3Q9BRR0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC27.02■■□□□ 1.92
ZKSCAN3Q9BRR0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
ZKSCAN3Q9BRR0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
ZKSCAN3Q9BRR0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC27.01■■□□□ 1.92
ZKSCAN3Q9BRR0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC27.01■■□□□ 1.92
ZKSCAN3Q9BRR0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
ZKSCAN3Q9BRR0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC27.01■■□□□ 1.91
ZKSCAN3Q9BRR0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
ZKSCAN3Q9BRR0 CD72-202ENST00000378430 585 ntTSL 3 BASIC27.01■■□□□ 1.91
ZKSCAN3Q9BRR0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
ZKSCAN3Q9BRR0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC27.01■■□□□ 1.91
ZKSCAN3Q9BRR0 AC131212.1-201ENST00000613771 668 ntBASIC27.01■■□□□ 1.91
ZKSCAN3Q9BRR0 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
ZKSCAN3Q9BRR0 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
ZKSCAN3Q9BRR0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
ZKSCAN3Q9BRR0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC27■■□□□ 1.91
ZKSCAN3Q9BRR0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC27■■□□□ 1.91
ZKSCAN3Q9BRR0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms