Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
APH1AQ96BI3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.38■□□□□ 0.85
APH1AQ96BI3 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.38■□□□□ 0.85
APH1AQ96BI3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
APH1AQ96BI3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
APH1AQ96BI3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
APH1AQ96BI3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.37■□□□□ 0.85
APH1AQ96BI3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.37■□□□□ 0.85
APH1AQ96BI3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
APH1AQ96BI3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
APH1AQ96BI3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.37■□□□□ 0.85
APH1AQ96BI3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.37■□□□□ 0.85
APH1AQ96BI3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
APH1AQ96BI3 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
APH1AQ96BI3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
APH1AQ96BI3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
APH1AQ96BI3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
APH1AQ96BI3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
APH1AQ96BI3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.36■□□□□ 0.85
APH1AQ96BI3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
APH1AQ96BI3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.36■□□□□ 0.85
APH1AQ96BI3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.36■□□□□ 0.85
APH1AQ96BI3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
APH1AQ96BI3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.35■□□□□ 0.85
APH1AQ96BI3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
APH1AQ96BI3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.35■□□□□ 0.85
APH1AQ96BI3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
APH1AQ96BI3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
APH1AQ96BI3 MIR6722-201ENST00000617286 78 ntBASIC20.35■□□□□ 0.85
APH1AQ96BI3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.35■□□□□ 0.85
APH1AQ96BI3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
APH1AQ96BI3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
APH1AQ96BI3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
APH1AQ96BI3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
APH1AQ96BI3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
APH1AQ96BI3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
APH1AQ96BI3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
APH1AQ96BI3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.34■□□□□ 0.85
APH1AQ96BI3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.34■□□□□ 0.85
APH1AQ96BI3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.34■□□□□ 0.85
APH1AQ96BI3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
APH1AQ96BI3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
APH1AQ96BI3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.34■□□□□ 0.85
APH1AQ96BI3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.34■□□□□ 0.85
APH1AQ96BI3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.33■□□□□ 0.85
APH1AQ96BI3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
APH1AQ96BI3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
APH1AQ96BI3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
APH1AQ96BI3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
APH1AQ96BI3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
APH1AQ96BI3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.33■□□□□ 0.85
APH1AQ96BI3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
APH1AQ96BI3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
APH1AQ96BI3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
APH1AQ96BI3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
APH1AQ96BI3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
APH1AQ96BI3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
APH1AQ96BI3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
APH1AQ96BI3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.32■□□□□ 0.84
APH1AQ96BI3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
APH1AQ96BI3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
APH1AQ96BI3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
APH1AQ96BI3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
APH1AQ96BI3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.31■□□□□ 0.84
APH1AQ96BI3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
APH1AQ96BI3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
APH1AQ96BI3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
APH1AQ96BI3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
APH1AQ96BI3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
APH1AQ96BI3 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
APH1AQ96BI3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
APH1AQ96BI3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.3■□□□□ 0.84
APH1AQ96BI3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.3■□□□□ 0.84
APH1AQ96BI3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.3■□□□□ 0.84
APH1AQ96BI3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
APH1AQ96BI3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APH1AQ96BI3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APH1AQ96BI3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.3■□□□□ 0.84
APH1AQ96BI3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APH1AQ96BI3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
APH1AQ96BI3 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.3■□□□□ 0.84
APH1AQ96BI3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.3■□□□□ 0.84
APH1AQ96BI3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.3■□□□□ 0.84
APH1AQ96BI3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.3■□□□□ 0.84
APH1AQ96BI3 MIR6724-1-201ENST00000616420 92 ntBASIC20.3■□□□□ 0.84
APH1AQ96BI3 MIR6724-2-201ENST00000616483 92 ntBASIC20.3■□□□□ 0.84
APH1AQ96BI3 MIR6724-4-201ENST00000617390 92 ntBASIC20.3■□□□□ 0.84
APH1AQ96BI3 MIR6724-3-201ENST00000622482 92 ntBASIC20.3■□□□□ 0.84
APH1AQ96BI3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APH1AQ96BI3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
APH1AQ96BI3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APH1AQ96BI3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APH1AQ96BI3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
APH1AQ96BI3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
APH1AQ96BI3 AL139125.2-201ENST00000623134 1869 ntBASIC20.29■□□□□ 0.84
APH1AQ96BI3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.29■□□□□ 0.84
APH1AQ96BI3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
APH1AQ96BI3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APH1AQ96BI3 LINC01124-201ENST00000409786 2117 ntBASIC20.29■□□□□ 0.84
APH1AQ96BI3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms