Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
USP6NLQ92738 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
USP6NLQ92738 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
USP6NLQ92738 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC26.27■■□□□ 1.8
USP6NLQ92738 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
USP6NLQ92738 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC26.27■■□□□ 1.8
USP6NLQ92738 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC26.27■■□□□ 1.8
USP6NLQ92738 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
USP6NLQ92738 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.27■■□□□ 1.8
USP6NLQ92738 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
USP6NLQ92738 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
USP6NLQ92738 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
USP6NLQ92738 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
USP6NLQ92738 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC26.26■■□□□ 1.79
USP6NLQ92738 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
USP6NLQ92738 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
USP6NLQ92738 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
USP6NLQ92738 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC26.25■■□□□ 1.79
USP6NLQ92738 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
USP6NLQ92738 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
USP6NLQ92738 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
USP6NLQ92738 AC009102.2-201ENST00000606772 1639 ntBASIC26.25■■□□□ 1.79
USP6NLQ92738 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
USP6NLQ92738 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC26.24■■□□□ 1.79
USP6NLQ92738 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
USP6NLQ92738 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
USP6NLQ92738 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
USP6NLQ92738 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
USP6NLQ92738 IRS3P-201ENST00000223076 1006 ntBASIC26.24■■□□□ 1.79
USP6NLQ92738 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC26.24■■□□□ 1.79
USP6NLQ92738 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC26.24■■□□□ 1.79
USP6NLQ92738 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
USP6NLQ92738 AC008764.7-201ENST00000593779 1081 ntBASIC26.24■■□□□ 1.79
USP6NLQ92738 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC26.24■■□□□ 1.79
USP6NLQ92738 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC26.24■■□□□ 1.79
USP6NLQ92738 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.24■■□□□ 1.79
USP6NLQ92738 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
USP6NLQ92738 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
USP6NLQ92738 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
USP6NLQ92738 JTB-203ENST00000368589 1216 ntTSL 2 BASIC26.23■■□□□ 1.79
USP6NLQ92738 GLI3-203ENST00000437480 451 ntTSL 2 BASIC26.23■■□□□ 1.79
USP6NLQ92738 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.23■■□□□ 1.79
USP6NLQ92738 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
USP6NLQ92738 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
USP6NLQ92738 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.21■■□□□ 1.79
USP6NLQ92738 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
USP6NLQ92738 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
USP6NLQ92738 AC099791.1-201ENST00000416440 715 ntBASIC26.21■■□□□ 1.79
USP6NLQ92738 RHOF-204ENST00000537265 699 ntTSL 2 BASIC26.21■■□□□ 1.79
USP6NLQ92738 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC26.21■■□□□ 1.79
USP6NLQ92738 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC26.21■■□□□ 1.79
USP6NLQ92738 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
USP6NLQ92738 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC26.21■■□□□ 1.79
USP6NLQ92738 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
USP6NLQ92738 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
USP6NLQ92738 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC26.21■■□□□ 1.79
USP6NLQ92738 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
USP6NLQ92738 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
USP6NLQ92738 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
USP6NLQ92738 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC26.2■■□□□ 1.78
USP6NLQ92738 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
USP6NLQ92738 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
USP6NLQ92738 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
USP6NLQ92738 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
USP6NLQ92738 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
USP6NLQ92738 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC26.19■■□□□ 1.78
USP6NLQ92738 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.19■■□□□ 1.78
USP6NLQ92738 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
USP6NLQ92738 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
USP6NLQ92738 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
USP6NLQ92738 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
USP6NLQ92738 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
USP6NLQ92738 HES6-206ENST00000409574 738 ntTSL 2 BASIC26.18■■□□□ 1.78
USP6NLQ92738 STK32C-205ENST00000456004 607 ntTSL 2 BASIC26.18■■□□□ 1.78
USP6NLQ92738 AC136469.2-201ENST00000623944 1028 ntBASIC26.18■■□□□ 1.78
USP6NLQ92738 C17orf82-201ENST00000623772 1530 ntBASIC26.18■■□□□ 1.78
USP6NLQ92738 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
USP6NLQ92738 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
USP6NLQ92738 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
USP6NLQ92738 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC26.17■■□□□ 1.78
USP6NLQ92738 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
USP6NLQ92738 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC26.17■■□□□ 1.78
USP6NLQ92738 AL121749.1-202ENST00000609313 2153 ntBASIC26.17■■□□□ 1.78
USP6NLQ92738 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
USP6NLQ92738 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC26.16■■□□□ 1.78
USP6NLQ92738 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
USP6NLQ92738 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
USP6NLQ92738 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
USP6NLQ92738 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC26.16■■□□□ 1.78
USP6NLQ92738 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC26.16■■□□□ 1.78
USP6NLQ92738 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
USP6NLQ92738 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC26.16■■□□□ 1.78
USP6NLQ92738 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
USP6NLQ92738 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
USP6NLQ92738 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
USP6NLQ92738 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
USP6NLQ92738 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
USP6NLQ92738 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
USP6NLQ92738 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.15■■□□□ 1.78
USP6NLQ92738 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms