Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VPS37AQ8NEZ2 LONRF2P2-201ENST00000439212 571 ntBASIC21.81■■□□□ 1.08
VPS37AQ8NEZ2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
VPS37AQ8NEZ2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.8■■□□□ 1.08
VPS37AQ8NEZ2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.8■■□□□ 1.08
VPS37AQ8NEZ2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS37AQ8NEZ2 AC012676.1-201ENST00000574705 1949 ntBASIC21.8■■□□□ 1.08
VPS37AQ8NEZ2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.8■■□□□ 1.08
VPS37AQ8NEZ2 HSD17B1P1-201ENST00000590052 955 ntBASIC21.8■■□□□ 1.08
VPS37AQ8NEZ2 U85056.1-201ENST00000616429 682 ntBASIC21.8■■□□□ 1.08
VPS37AQ8NEZ2 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS37AQ8NEZ2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
VPS37AQ8NEZ2 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
VPS37AQ8NEZ2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
VPS37AQ8NEZ2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS37AQ8NEZ2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VPS37AQ8NEZ2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
VPS37AQ8NEZ2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
VPS37AQ8NEZ2 AC129492.7-201ENST00000622992 756 ntBASIC21.79■■□□□ 1.08
VPS37AQ8NEZ2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VPS37AQ8NEZ2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.79■■□□□ 1.08
VPS37AQ8NEZ2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.79■■□□□ 1.08
VPS37AQ8NEZ2 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.79■■□□□ 1.08
VPS37AQ8NEZ2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VPS37AQ8NEZ2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.78■■□□□ 1.08
VPS37AQ8NEZ2 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
VPS37AQ8NEZ2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
VPS37AQ8NEZ2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VPS37AQ8NEZ2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VPS37AQ8NEZ2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VPS37AQ8NEZ2 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VPS37AQ8NEZ2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.78■■□□□ 1.08
VPS37AQ8NEZ2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.78■■□□□ 1.08
VPS37AQ8NEZ2 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.78■■□□□ 1.08
VPS37AQ8NEZ2 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.78■■□□□ 1.08
VPS37AQ8NEZ2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
VPS37AQ8NEZ2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VPS37AQ8NEZ2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
VPS37AQ8NEZ2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.77■■□□□ 1.08
VPS37AQ8NEZ2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
VPS37AQ8NEZ2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
VPS37AQ8NEZ2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.76■■□□□ 1.07
VPS37AQ8NEZ2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VPS37AQ8NEZ2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
VPS37AQ8NEZ2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VPS37AQ8NEZ2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.76■■□□□ 1.07
VPS37AQ8NEZ2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VPS37AQ8NEZ2 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.76■■□□□ 1.07
VPS37AQ8NEZ2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
VPS37AQ8NEZ2 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VPS37AQ8NEZ2 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VPS37AQ8NEZ2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.75■■□□□ 1.07
VPS37AQ8NEZ2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VPS37AQ8NEZ2 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.75■■□□□ 1.07
VPS37AQ8NEZ2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VPS37AQ8NEZ2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VPS37AQ8NEZ2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
VPS37AQ8NEZ2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.75■■□□□ 1.07
VPS37AQ8NEZ2 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VPS37AQ8NEZ2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.75■■□□□ 1.07
VPS37AQ8NEZ2 AC011551.1-201ENST00000614101 683 ntBASIC21.75■■□□□ 1.07
VPS37AQ8NEZ2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
VPS37AQ8NEZ2 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VPS37AQ8NEZ2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.74■■□□□ 1.07
VPS37AQ8NEZ2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VPS37AQ8NEZ2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS37AQ8NEZ2 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VPS37AQ8NEZ2 AL022069.1-201ENST00000568025 1636 ntBASIC21.74■■□□□ 1.07
VPS37AQ8NEZ2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VPS37AQ8NEZ2 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS37AQ8NEZ2 AC022616.5-201ENST00000518796 181 ntBASIC21.74■■□□□ 1.07
VPS37AQ8NEZ2 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.74■■□□□ 1.07
VPS37AQ8NEZ2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS37AQ8NEZ2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.74■■□□□ 1.07
VPS37AQ8NEZ2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS37AQ8NEZ2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.74■■□□□ 1.07
VPS37AQ8NEZ2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS37AQ8NEZ2 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VPS37AQ8NEZ2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS37AQ8NEZ2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS37AQ8NEZ2 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
VPS37AQ8NEZ2 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VPS37AQ8NEZ2 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
VPS37AQ8NEZ2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
VPS37AQ8NEZ2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.73■■□□□ 1.07
VPS37AQ8NEZ2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
VPS37AQ8NEZ2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
VPS37AQ8NEZ2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VPS37AQ8NEZ2 KRT18P60-201ENST00000312876 1297 ntBASIC21.73■■□□□ 1.07
VPS37AQ8NEZ2 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
VPS37AQ8NEZ2 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.73■■□□□ 1.07
VPS37AQ8NEZ2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VPS37AQ8NEZ2 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
VPS37AQ8NEZ2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
VPS37AQ8NEZ2 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
VPS37AQ8NEZ2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VPS37AQ8NEZ2 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VPS37AQ8NEZ2 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VPS37AQ8NEZ2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VPS37AQ8NEZ2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms