Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC28.57■■■□□ 2.16
RTL9Q8NET4 AL031432.3-201ENST00000607698 485 ntBASIC28.57■■■□□ 2.16
RTL9Q8NET4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
RTL9Q8NET4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
RTL9Q8NET4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC28.56■■■□□ 2.16
RTL9Q8NET4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC28.56■■■□□ 2.16
RTL9Q8NET4 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC28.56■■■□□ 2.16
RTL9Q8NET4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC28.55■■■□□ 2.16
RTL9Q8NET4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC28.55■■■□□ 2.16
RTL9Q8NET4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC28.55■■■□□ 2.16
RTL9Q8NET4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC28.55■■■□□ 2.16
RTL9Q8NET4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
RTL9Q8NET4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC28.55■■■□□ 2.16
RTL9Q8NET4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC28.55■■■□□ 2.16
RTL9Q8NET4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC28.54■■■□□ 2.16
RTL9Q8NET4 PBX2P1-201ENST00000493219 1291 ntBASIC28.54■■■□□ 2.16
RTL9Q8NET4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC28.54■■■□□ 2.16
RTL9Q8NET4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
RTL9Q8NET4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
RTL9Q8NET4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC28.54■■■□□ 2.16
RTL9Q8NET4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
RTL9Q8NET4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC28.53■■■□□ 2.16
RTL9Q8NET4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
RTL9Q8NET4 RARRES2P6-201ENST00000567333 442 ntBASIC28.53■■■□□ 2.16
RTL9Q8NET4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
RTL9Q8NET4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC28.53■■■□□ 2.16
RTL9Q8NET4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
RTL9Q8NET4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
RTL9Q8NET4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
RTL9Q8NET4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
RTL9Q8NET4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
RTL9Q8NET4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
RTL9Q8NET4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
RTL9Q8NET4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
RTL9Q8NET4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
RTL9Q8NET4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC28.52■■■□□ 2.16
RTL9Q8NET4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC28.52■■■□□ 2.16
RTL9Q8NET4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
RTL9Q8NET4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC28.52■■■□□ 2.16
RTL9Q8NET4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
RTL9Q8NET4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC28.52■■■□□ 2.16
RTL9Q8NET4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC28.52■■■□□ 2.16
RTL9Q8NET4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
RTL9Q8NET4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
RTL9Q8NET4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC28.51■■■□□ 2.16
RTL9Q8NET4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC28.51■■■□□ 2.16
RTL9Q8NET4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC28.51■■■□□ 2.16
RTL9Q8NET4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.16
RTL9Q8NET4 AL161729.1-201ENST00000604104 1402 ntBASIC28.51■■■□□ 2.15
RTL9Q8NET4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.15
RTL9Q8NET4 UNC93B3-201ENST00000308076 687 ntBASIC28.5■■■□□ 2.15
RTL9Q8NET4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC28.5■■■□□ 2.15
RTL9Q8NET4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC28.5■■■□□ 2.15
RTL9Q8NET4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
RTL9Q8NET4 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
RTL9Q8NET4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC28.5■■■□□ 2.15
RTL9Q8NET4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
RTL9Q8NET4 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
RTL9Q8NET4 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
RTL9Q8NET4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC28.49■■■□□ 2.15
RTL9Q8NET4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC28.49■■■□□ 2.15
RTL9Q8NET4 SUDS3P1-201ENST00000505831 966 ntBASIC28.49■■■□□ 2.15
RTL9Q8NET4 AL136162.1-201ENST00000607711 1078 ntBASIC28.49■■■□□ 2.15
RTL9Q8NET4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
RTL9Q8NET4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC28.48■■■□□ 2.15
RTL9Q8NET4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC28.48■■■□□ 2.15
RTL9Q8NET4 AC026271.2-201ENST00000428091 497 ntBASIC28.48■■■□□ 2.15
RTL9Q8NET4 AC142381.2-201ENST00000566120 298 ntBASIC28.48■■■□□ 2.15
RTL9Q8NET4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
RTL9Q8NET4 AC135279.3-201ENST00000610945 1311 ntBASIC28.47■■■□□ 2.15
RTL9Q8NET4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC28.47■■■□□ 2.15
RTL9Q8NET4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
RTL9Q8NET4 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
RTL9Q8NET4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
RTL9Q8NET4 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
RTL9Q8NET4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
RTL9Q8NET4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC28.47■■■□□ 2.15
RTL9Q8NET4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC28.47■■■□□ 2.15
RTL9Q8NET4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC28.47■■■□□ 2.15
RTL9Q8NET4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC28.47■■■□□ 2.15
RTL9Q8NET4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
RTL9Q8NET4 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
RTL9Q8NET4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
RTL9Q8NET4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
RTL9Q8NET4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC28.46■■■□□ 2.15
RTL9Q8NET4 SF1-220ENST00000626028 704 ntTSL 2 BASIC28.46■■■□□ 2.15
RTL9Q8NET4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
RTL9Q8NET4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC28.45■■■□□ 2.14
RTL9Q8NET4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
RTL9Q8NET4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
RTL9Q8NET4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
RTL9Q8NET4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
RTL9Q8NET4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC28.44■■■□□ 2.14
RTL9Q8NET4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC28.44■■■□□ 2.14
RTL9Q8NET4 AC024257.2-201ENST00000549699 147 ntBASIC28.44■■■□□ 2.14
RTL9Q8NET4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
RTL9Q8NET4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
RTL9Q8NET4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC28.43■■■□□ 2.14
RTL9Q8NET4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
RTL9Q8NET4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms