Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PNMA1Q8ND90 EED-207ENST00000528180 1745 ntTSL 5 BASIC26.9■■□□□ 1.9
PNMA1Q8ND90 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PNMA1Q8ND90 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC26.9■■□□□ 1.9
PNMA1Q8ND90 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC26.9■■□□□ 1.9
PNMA1Q8ND90 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PNMA1Q8ND90 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PNMA1Q8ND90 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PNMA1Q8ND90 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.9■■□□□ 1.9
PNMA1Q8ND90 MIR6724-1-201ENST00000616420 92 ntBASIC26.9■■□□□ 1.9
PNMA1Q8ND90 MIR6724-2-201ENST00000616483 92 ntBASIC26.9■■□□□ 1.9
PNMA1Q8ND90 MIR6724-4-201ENST00000617390 92 ntBASIC26.9■■□□□ 1.9
PNMA1Q8ND90 MIR6724-3-201ENST00000622482 92 ntBASIC26.9■■□□□ 1.9
PNMA1Q8ND90 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
PNMA1Q8ND90 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC26.9■■□□□ 1.9
PNMA1Q8ND90 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.9■■□□□ 1.9
PNMA1Q8ND90 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.9■■□□□ 1.9
PNMA1Q8ND90 CD37-213ENST00000598095 1598 ntTSL 2 BASIC26.89■■□□□ 1.9
PNMA1Q8ND90 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
PNMA1Q8ND90 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PNMA1Q8ND90 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC26.89■■□□□ 1.9
PNMA1Q8ND90 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PNMA1Q8ND90 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
PNMA1Q8ND90 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
PNMA1Q8ND90 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC26.89■■□□□ 1.89
PNMA1Q8ND90 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PNMA1Q8ND90 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
PNMA1Q8ND90 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PNMA1Q8ND90 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.88■■□□□ 1.89
PNMA1Q8ND90 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PNMA1Q8ND90 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC26.88■■□□□ 1.89
PNMA1Q8ND90 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
PNMA1Q8ND90 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC26.87■■□□□ 1.89
PNMA1Q8ND90 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PNMA1Q8ND90 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PNMA1Q8ND90 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
PNMA1Q8ND90 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC26.87■■□□□ 1.89
PNMA1Q8ND90 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PNMA1Q8ND90 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC26.86■■□□□ 1.89
PNMA1Q8ND90 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC26.85■■□□□ 1.89
PNMA1Q8ND90 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.85■■□□□ 1.89
PNMA1Q8ND90 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PNMA1Q8ND90 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.85■■□□□ 1.89
PNMA1Q8ND90 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PNMA1Q8ND90 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PNMA1Q8ND90 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
PNMA1Q8ND90 AL161729.1-201ENST00000604104 1402 ntBASIC26.84■■□□□ 1.89
PNMA1Q8ND90 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
PNMA1Q8ND90 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
PNMA1Q8ND90 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC26.84■■□□□ 1.89
PNMA1Q8ND90 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PNMA1Q8ND90 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.84■■□□□ 1.89
PNMA1Q8ND90 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
PNMA1Q8ND90 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PNMA1Q8ND90 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
PNMA1Q8ND90 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.83■■□□□ 1.89
PNMA1Q8ND90 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
PNMA1Q8ND90 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC26.83■■□□□ 1.89
PNMA1Q8ND90 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC26.83■■□□□ 1.89
PNMA1Q8ND90 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.83■■□□□ 1.89
PNMA1Q8ND90 AL117332.1-201ENST00000622628 974 ntBASIC26.83■■□□□ 1.89
PNMA1Q8ND90 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PNMA1Q8ND90 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC26.82■■□□□ 1.88
PNMA1Q8ND90 AL139125.2-201ENST00000623134 1869 ntBASIC26.82■■□□□ 1.88
PNMA1Q8ND90 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
PNMA1Q8ND90 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
PNMA1Q8ND90 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
PNMA1Q8ND90 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
PNMA1Q8ND90 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
PNMA1Q8ND90 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC26.81■■□□□ 1.88
PNMA1Q8ND90 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PNMA1Q8ND90 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.81■■□□□ 1.88
PNMA1Q8ND90 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PNMA1Q8ND90 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
PNMA1Q8ND90 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.8■■□□□ 1.88
PNMA1Q8ND90 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PNMA1Q8ND90 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PNMA1Q8ND90 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
PNMA1Q8ND90 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.79■■□□□ 1.88
PNMA1Q8ND90 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.79■■□□□ 1.88
PNMA1Q8ND90 MIR3621-201ENST00000580529 85 ntBASIC26.79■■□□□ 1.88
PNMA1Q8ND90 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
PNMA1Q8ND90 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
PNMA1Q8ND90 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.78■■□□□ 1.88
PNMA1Q8ND90 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC26.78■■□□□ 1.88
PNMA1Q8ND90 REST-206ENST00000612429 1376 ntTSL 5 BASIC26.78■■□□□ 1.88
PNMA1Q8ND90 REST-207ENST00000616975 1370 ntTSL 5 BASIC26.78■■□□□ 1.88
PNMA1Q8ND90 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
PNMA1Q8ND90 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
PNMA1Q8ND90 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
PNMA1Q8ND90 LINC01124-201ENST00000409786 2117 ntBASIC26.78■■□□□ 1.88
PNMA1Q8ND90 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PNMA1Q8ND90 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PNMA1Q8ND90 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
PNMA1Q8ND90 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PNMA1Q8ND90 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC26.77■■□□□ 1.88
PNMA1Q8ND90 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.77■■□□□ 1.88
PNMA1Q8ND90 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.77■■□□□ 1.88
PNMA1Q8ND90 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PNMA1Q8ND90 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms