Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
SMRP1Q8NCR6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
SMRP1Q8NCR6 BX842568.3-201ENST00000418104 571 ntBASIC24.11■■□□□ 1.45
SMRP1Q8NCR6 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC24.11■■□□□ 1.45
SMRP1Q8NCR6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SMRP1Q8NCR6 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
SMRP1Q8NCR6 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SMRP1Q8NCR6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC24.1■■□□□ 1.45
SMRP1Q8NCR6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SMRP1Q8NCR6 YBX1P1-201ENST00000445822 960 ntBASIC24.1■■□□□ 1.45
SMRP1Q8NCR6 SLC47A1P1-202ENST00000449666 945 ntBASIC24.1■■□□□ 1.45
SMRP1Q8NCR6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC24.1■■□□□ 1.45
SMRP1Q8NCR6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC24.1■■□□□ 1.45
SMRP1Q8NCR6 AC241377.3-202ENST00000626088 1088 ntBASIC24.1■■□□□ 1.45
SMRP1Q8NCR6 AC241585.3-202ENST00000628937 1088 ntBASIC24.1■■□□□ 1.45
SMRP1Q8NCR6 AC245100.8-202ENST00000629247 1058 ntBASIC24.1■■□□□ 1.45
SMRP1Q8NCR6 AC096887.2-201ENST00000623443 1957 ntBASIC24.1■■□□□ 1.45
SMRP1Q8NCR6 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
SMRP1Q8NCR6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SMRP1Q8NCR6 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.1■■□□□ 1.45
SMRP1Q8NCR6 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SMRP1Q8NCR6 GRAMD4P2-201ENST00000423297 1097 ntBASIC24.09■■□□□ 1.45
SMRP1Q8NCR6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.09■■□□□ 1.45
SMRP1Q8NCR6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC24.09■■□□□ 1.45
SMRP1Q8NCR6 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.09■■□□□ 1.45
SMRP1Q8NCR6 C17orf82-201ENST00000623772 1530 ntBASIC24.09■■□□□ 1.45
SMRP1Q8NCR6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC24.09■■□□□ 1.45
SMRP1Q8NCR6 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
SMRP1Q8NCR6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SMRP1Q8NCR6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC24.08■■□□□ 1.45
SMRP1Q8NCR6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SMRP1Q8NCR6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.08■■□□□ 1.45
SMRP1Q8NCR6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.08■■□□□ 1.45
SMRP1Q8NCR6 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SMRP1Q8NCR6 AL031602.1-201ENST00000633169 911 ntBASIC24.08■■□□□ 1.45
SMRP1Q8NCR6 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC24.08■■□□□ 1.45
SMRP1Q8NCR6 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SMRP1Q8NCR6 AC131274.2-201ENST00000580697 1507 ntBASIC24.08■■□□□ 1.45
SMRP1Q8NCR6 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
SMRP1Q8NCR6 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
SMRP1Q8NCR6 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SMRP1Q8NCR6 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SMRP1Q8NCR6 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC24.07■■□□□ 1.44
SMRP1Q8NCR6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC24.07■■□□□ 1.44
SMRP1Q8NCR6 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC24.07■■□□□ 1.44
SMRP1Q8NCR6 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC24.07■■□□□ 1.44
SMRP1Q8NCR6 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
SMRP1Q8NCR6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
SMRP1Q8NCR6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
SMRP1Q8NCR6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SMRP1Q8NCR6 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SMRP1Q8NCR6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SMRP1Q8NCR6 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SMRP1Q8NCR6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.05■■□□□ 1.44
SMRP1Q8NCR6 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
SMRP1Q8NCR6 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC24.05■■□□□ 1.44
SMRP1Q8NCR6 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
SMRP1Q8NCR6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SMRP1Q8NCR6 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
SMRP1Q8NCR6 AC006455.2-201ENST00000429931 906 ntBASIC24.04■■□□□ 1.44
SMRP1Q8NCR6 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.04■■□□□ 1.44
SMRP1Q8NCR6 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
SMRP1Q8NCR6 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC24.04■■□□□ 1.44
SMRP1Q8NCR6 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SMRP1Q8NCR6 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SMRP1Q8NCR6 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
SMRP1Q8NCR6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SMRP1Q8NCR6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
SMRP1Q8NCR6 DUX4L2-201ENST00000561772 1275 ntBASIC24.03■■□□□ 1.44
SMRP1Q8NCR6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24.03■■□□□ 1.44
SMRP1Q8NCR6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.03■■□□□ 1.44
SMRP1Q8NCR6 DUX4L6-201ENST00000626483 1275 ntBASIC24.03■■□□□ 1.44
SMRP1Q8NCR6 DUX4L1-201ENST00000627662 1275 ntBASIC24.03■■□□□ 1.44
SMRP1Q8NCR6 DUX4L8-201ENST00000629013 1275 ntBASIC24.03■■□□□ 1.44
SMRP1Q8NCR6 DUX4L3-201ENST00000630187 1275 ntBASIC24.03■■□□□ 1.44
SMRP1Q8NCR6 DUX4L7-201ENST00000630678 1275 ntBASIC24.03■■□□□ 1.44
SMRP1Q8NCR6 DUX4L5-201ENST00000630834 1275 ntBASIC24.03■■□□□ 1.44
SMRP1Q8NCR6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SMRP1Q8NCR6 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.03■■□□□ 1.44
SMRP1Q8NCR6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SMRP1Q8NCR6 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SMRP1Q8NCR6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.02■■□□□ 1.44
SMRP1Q8NCR6 ID1-201ENST00000376105 1233 ntBASIC24.02■■□□□ 1.44
SMRP1Q8NCR6 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.02■■□□□ 1.44
SMRP1Q8NCR6 MIR3181-201ENST00000578512 73 ntBASIC24.02■■□□□ 1.44
SMRP1Q8NCR6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.02■■□□□ 1.44
SMRP1Q8NCR6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SMRP1Q8NCR6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SMRP1Q8NCR6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SMRP1Q8NCR6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.01■■□□□ 1.43
SMRP1Q8NCR6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.01■■□□□ 1.43
SMRP1Q8NCR6 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SMRP1Q8NCR6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SMRP1Q8NCR6 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
SMRP1Q8NCR6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.01■■□□□ 1.43
SMRP1Q8NCR6 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC24.01■■□□□ 1.43
SMRP1Q8NCR6 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC24.01■■□□□ 1.43
SMRP1Q8NCR6 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
SMRP1Q8NCR6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SMRP1Q8NCR6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms