Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
C3orf56Q8N813 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
C3orf56Q8N813 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
C3orf56Q8N813 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
C3orf56Q8N813 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
C3orf56Q8N813 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
C3orf56Q8N813 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
C3orf56Q8N813 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
C3orf56Q8N813 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
C3orf56Q8N813 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18■□□□□ 0.47
C3orf56Q8N813 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
C3orf56Q8N813 GXYLT1P2-201ENST00000433312 1230 ntBASIC18■□□□□ 0.47
C3orf56Q8N813 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18■□□□□ 0.47
C3orf56Q8N813 AC136469.2-201ENST00000623944 1028 ntBASIC18■□□□□ 0.47
C3orf56Q8N813 AC245100.8-202ENST00000629247 1058 ntBASIC18■□□□□ 0.47
C3orf56Q8N813 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
C3orf56Q8N813 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
C3orf56Q8N813 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18■□□□□ 0.47
C3orf56Q8N813 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
C3orf56Q8N813 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.99■□□□□ 0.47
C3orf56Q8N813 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
C3orf56Q8N813 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.99■□□□□ 0.47
C3orf56Q8N813 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
C3orf56Q8N813 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC17.99■□□□□ 0.47
C3orf56Q8N813 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C3orf56Q8N813 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C3orf56Q8N813 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.99■□□□□ 0.47
C3orf56Q8N813 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
C3orf56Q8N813 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.99■□□□□ 0.47
C3orf56Q8N813 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
C3orf56Q8N813 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C3orf56Q8N813 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
C3orf56Q8N813 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C3orf56Q8N813 BX842568.3-201ENST00000418104 571 ntBASIC17.98■□□□□ 0.47
C3orf56Q8N813 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.98■□□□□ 0.47
C3orf56Q8N813 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.98■□□□□ 0.47
C3orf56Q8N813 AC126544.1-201ENST00000580842 1059 ntBASIC17.98■□□□□ 0.47
C3orf56Q8N813 AC241377.3-202ENST00000626088 1088 ntBASIC17.98■□□□□ 0.47
C3orf56Q8N813 AC241585.3-202ENST00000628937 1088 ntBASIC17.98■□□□□ 0.47
C3orf56Q8N813 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.98■□□□□ 0.47
C3orf56Q8N813 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C3orf56Q8N813 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
C3orf56Q8N813 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
C3orf56Q8N813 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
C3orf56Q8N813 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
C3orf56Q8N813 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
C3orf56Q8N813 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
C3orf56Q8N813 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
C3orf56Q8N813 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.97■□□□□ 0.47
C3orf56Q8N813 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.97■□□□□ 0.47
C3orf56Q8N813 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
C3orf56Q8N813 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
C3orf56Q8N813 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
C3orf56Q8N813 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC17.97■□□□□ 0.47
C3orf56Q8N813 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
C3orf56Q8N813 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
C3orf56Q8N813 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
C3orf56Q8N813 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.97■□□□□ 0.47
C3orf56Q8N813 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
C3orf56Q8N813 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.96■□□□□ 0.47
C3orf56Q8N813 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.96■□□□□ 0.47
C3orf56Q8N813 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
C3orf56Q8N813 AC092437.1-201ENST00000624794 1048 ntBASIC17.96■□□□□ 0.47
C3orf56Q8N813 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
C3orf56Q8N813 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
C3orf56Q8N813 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
C3orf56Q8N813 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C3orf56Q8N813 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
C3orf56Q8N813 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C3orf56Q8N813 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C3orf56Q8N813 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.95■□□□□ 0.46
C3orf56Q8N813 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
C3orf56Q8N813 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C3orf56Q8N813 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.95■□□□□ 0.46
C3orf56Q8N813 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
C3orf56Q8N813 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.95■□□□□ 0.46
C3orf56Q8N813 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC17.95■□□□□ 0.46
C3orf56Q8N813 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
C3orf56Q8N813 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
C3orf56Q8N813 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.94■□□□□ 0.46
C3orf56Q8N813 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
C3orf56Q8N813 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
C3orf56Q8N813 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
C3orf56Q8N813 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.94■□□□□ 0.46
C3orf56Q8N813 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
C3orf56Q8N813 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
C3orf56Q8N813 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
C3orf56Q8N813 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
C3orf56Q8N813 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC17.93■□□□□ 0.46
C3orf56Q8N813 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
C3orf56Q8N813 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
C3orf56Q8N813 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
C3orf56Q8N813 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
C3orf56Q8N813 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
C3orf56Q8N813 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
C3orf56Q8N813 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.93■□□□□ 0.46
C3orf56Q8N813 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.93■□□□□ 0.46
C3orf56Q8N813 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.93■□□□□ 0.46
C3orf56Q8N813 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
C3orf56Q8N813 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms