Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AP003733.4-201ENST00000623785 1697 ntBASIC23.44■■□□□ 1.34
PCDH20Q8N6Y1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDH20Q8N6Y1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDH20Q8N6Y1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDH20Q8N6Y1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDH20Q8N6Y1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDH20Q8N6Y1 AC004448.1-201ENST00000458332 883 ntBASIC23.44■■□□□ 1.34
PCDH20Q8N6Y1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.44■■□□□ 1.34
PCDH20Q8N6Y1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDH20Q8N6Y1 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDH20Q8N6Y1 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDH20Q8N6Y1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.44■■□□□ 1.34
PCDH20Q8N6Y1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDH20Q8N6Y1 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDH20Q8N6Y1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PCDH20Q8N6Y1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDH20Q8N6Y1 MIR6722-201ENST00000617286 78 ntBASIC23.43■■□□□ 1.34
PCDH20Q8N6Y1 AC142381.3-201ENST00000568208 1670 ntBASIC23.43■■□□□ 1.34
PCDH20Q8N6Y1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.43■■□□□ 1.34
PCDH20Q8N6Y1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.43■■□□□ 1.34
PCDH20Q8N6Y1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.42■■□□□ 1.34
PCDH20Q8N6Y1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.42■■□□□ 1.34
PCDH20Q8N6Y1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PCDH20Q8N6Y1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.42■■□□□ 1.34
PCDH20Q8N6Y1 MIR6724-1-201ENST00000616420 92 ntBASIC23.42■■□□□ 1.34
PCDH20Q8N6Y1 MIR6724-2-201ENST00000616483 92 ntBASIC23.42■■□□□ 1.34
PCDH20Q8N6Y1 MIR6724-4-201ENST00000617390 92 ntBASIC23.42■■□□□ 1.34
PCDH20Q8N6Y1 MIR6724-3-201ENST00000622482 92 ntBASIC23.42■■□□□ 1.34
PCDH20Q8N6Y1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.42■■□□□ 1.34
PCDH20Q8N6Y1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
PCDH20Q8N6Y1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCDH20Q8N6Y1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDH20Q8N6Y1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDH20Q8N6Y1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.41■■□□□ 1.34
PCDH20Q8N6Y1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.41■■□□□ 1.34
PCDH20Q8N6Y1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PCDH20Q8N6Y1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.41■■□□□ 1.34
PCDH20Q8N6Y1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.41■■□□□ 1.34
PCDH20Q8N6Y1 AC131274.2-201ENST00000580697 1507 ntBASIC23.41■■□□□ 1.34
PCDH20Q8N6Y1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PCDH20Q8N6Y1 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDH20Q8N6Y1 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PCDH20Q8N6Y1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
PCDH20Q8N6Y1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDH20Q8N6Y1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
PCDH20Q8N6Y1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDH20Q8N6Y1 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDH20Q8N6Y1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PCDH20Q8N6Y1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
PCDH20Q8N6Y1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
PCDH20Q8N6Y1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.39■■□□□ 1.34
PCDH20Q8N6Y1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
PCDH20Q8N6Y1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
PCDH20Q8N6Y1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
PCDH20Q8N6Y1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
PCDH20Q8N6Y1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.39■■□□□ 1.33
PCDH20Q8N6Y1 AL022069.1-201ENST00000568025 1636 ntBASIC23.39■■□□□ 1.33
PCDH20Q8N6Y1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.39■■□□□ 1.33
PCDH20Q8N6Y1 HLA-L-211ENST00000482052 1765 ntBASIC23.39■■□□□ 1.33
PCDH20Q8N6Y1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.39■■□□□ 1.33
PCDH20Q8N6Y1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.39■■□□□ 1.33
PCDH20Q8N6Y1 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDH20Q8N6Y1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.38■■□□□ 1.33
PCDH20Q8N6Y1 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.38■■□□□ 1.33
PCDH20Q8N6Y1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.38■■□□□ 1.33
PCDH20Q8N6Y1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.38■■□□□ 1.33
PCDH20Q8N6Y1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.38■■□□□ 1.33
PCDH20Q8N6Y1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH20Q8N6Y1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH20Q8N6Y1 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH20Q8N6Y1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH20Q8N6Y1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH20Q8N6Y1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.37■■□□□ 1.33
PCDH20Q8N6Y1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH20Q8N6Y1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDH20Q8N6Y1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.36■■□□□ 1.33
PCDH20Q8N6Y1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.36■■□□□ 1.33
PCDH20Q8N6Y1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.36■■□□□ 1.33
PCDH20Q8N6Y1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
PCDH20Q8N6Y1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.35■■□□□ 1.33
PCDH20Q8N6Y1 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH20Q8N6Y1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH20Q8N6Y1 AC138932.3-201ENST00000567634 1902 ntBASIC23.35■■□□□ 1.33
PCDH20Q8N6Y1 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.35■■□□□ 1.33
PCDH20Q8N6Y1 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH20Q8N6Y1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.35■■□□□ 1.33
PCDH20Q8N6Y1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH20Q8N6Y1 AL161729.1-201ENST00000604104 1402 ntBASIC23.34■■□□□ 1.33
PCDH20Q8N6Y1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.34■■□□□ 1.33
PCDH20Q8N6Y1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.34■■□□□ 1.33
PCDH20Q8N6Y1 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDH20Q8N6Y1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH20Q8N6Y1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.34■■□□□ 1.33
PCDH20Q8N6Y1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH20Q8N6Y1 AL117332.1-201ENST00000622628 974 ntBASIC23.34■■□□□ 1.33
PCDH20Q8N6Y1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.34■■□□□ 1.33
PCDH20Q8N6Y1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH20Q8N6Y1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH20Q8N6Y1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
PCDH20Q8N6Y1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms