Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SIX5Q8N196 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SIX5Q8N196 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.62■■□□□ 1.37
SIX5Q8N196 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SIX5Q8N196 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SIX5Q8N196 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.61■■□□□ 1.37
SIX5Q8N196 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.61■■□□□ 1.37
SIX5Q8N196 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SIX5Q8N196 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.61■■□□□ 1.37
SIX5Q8N196 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
SIX5Q8N196 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SIX5Q8N196 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SIX5Q8N196 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
SIX5Q8N196 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.6■■□□□ 1.37
SIX5Q8N196 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SIX5Q8N196 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SIX5Q8N196 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SIX5Q8N196 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SIX5Q8N196 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.6■■□□□ 1.37
SIX5Q8N196 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SIX5Q8N196 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
SIX5Q8N196 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
SIX5Q8N196 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.59■■□□□ 1.37
SIX5Q8N196 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SIX5Q8N196 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.59■■□□□ 1.37
SIX5Q8N196 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SIX5Q8N196 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SIX5Q8N196 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
SIX5Q8N196 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SIX5Q8N196 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SIX5Q8N196 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
SIX5Q8N196 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
SIX5Q8N196 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SIX5Q8N196 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
SIX5Q8N196 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SIX5Q8N196 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.57■■□□□ 1.36
SIX5Q8N196 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.57■■□□□ 1.36
SIX5Q8N196 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.57■■□□□ 1.36
SIX5Q8N196 KRT18P5-201ENST00000436075 1291 ntBASIC23.57■■□□□ 1.36
SIX5Q8N196 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.57■■□□□ 1.36
SIX5Q8N196 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.57■■□□□ 1.36
SIX5Q8N196 AC233992.3-201ENST00000607491 485 ntBASIC23.57■■□□□ 1.36
SIX5Q8N196 AC136469.2-201ENST00000623944 1028 ntBASIC23.57■■□□□ 1.36
SIX5Q8N196 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SIX5Q8N196 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
SIX5Q8N196 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.57■■□□□ 1.36
SIX5Q8N196 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.57■■□□□ 1.36
SIX5Q8N196 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.56■■□□□ 1.36
SIX5Q8N196 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.56■■□□□ 1.36
SIX5Q8N196 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.56■■□□□ 1.36
SIX5Q8N196 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SIX5Q8N196 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.56■■□□□ 1.36
SIX5Q8N196 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.56■■□□□ 1.36
SIX5Q8N196 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC23.56■■□□□ 1.36
SIX5Q8N196 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.56■■□□□ 1.36
SIX5Q8N196 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SIX5Q8N196 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SIX5Q8N196 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SIX5Q8N196 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.56■■□□□ 1.36
SIX5Q8N196 AC097639.1-201ENST00000565519 1891 ntBASIC23.56■■□□□ 1.36
SIX5Q8N196 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SIX5Q8N196 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.55■■□□□ 1.36
SIX5Q8N196 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.55■■□□□ 1.36
SIX5Q8N196 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.55■■□□□ 1.36
SIX5Q8N196 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SIX5Q8N196 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SIX5Q8N196 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
SIX5Q8N196 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SIX5Q8N196 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SIX5Q8N196 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SIX5Q8N196 SLC47A1P1-202ENST00000449666 945 ntBASIC23.54■■□□□ 1.36
SIX5Q8N196 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SIX5Q8N196 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.54■■□□□ 1.36
SIX5Q8N196 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.54■■□□□ 1.36
SIX5Q8N196 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SIX5Q8N196 AC009102.2-201ENST00000606772 1639 ntBASIC23.54■■□□□ 1.36
SIX5Q8N196 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.54■■□□□ 1.36
SIX5Q8N196 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.53■■□□□ 1.36
SIX5Q8N196 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SIX5Q8N196 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
SIX5Q8N196 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SIX5Q8N196 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SIX5Q8N196 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SIX5Q8N196 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.53■■□□□ 1.36
SIX5Q8N196 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.53■■□□□ 1.36
SIX5Q8N196 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.53■■□□□ 1.36
SIX5Q8N196 AC092437.1-201ENST00000624794 1048 ntBASIC23.53■■□□□ 1.36
SIX5Q8N196 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
SIX5Q8N196 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
SIX5Q8N196 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
SIX5Q8N196 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
SIX5Q8N196 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SIX5Q8N196 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SIX5Q8N196 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SIX5Q8N196 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.52■■□□□ 1.36
SIX5Q8N196 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
SIX5Q8N196 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
SIX5Q8N196 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SIX5Q8N196 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
SIX5Q8N196 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms