Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
RP1L1Q8IWN7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RP1L1Q8IWN7 AC027682.1-201ENST00000562846 899 ntBASIC20.82■□□□□ 0.92
RP1L1Q8IWN7 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
RP1L1Q8IWN7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RP1L1Q8IWN7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.82■□□□□ 0.92
RP1L1Q8IWN7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.82■□□□□ 0.92
RP1L1Q8IWN7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RP1L1Q8IWN7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RP1L1Q8IWN7 ID1-201ENST00000376105 1233 ntBASIC20.81■□□□□ 0.92
RP1L1Q8IWN7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RP1L1Q8IWN7 IKBKGP1-201ENST00000612193 1073 ntBASIC20.81■□□□□ 0.92
RP1L1Q8IWN7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.81■□□□□ 0.92
RP1L1Q8IWN7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
RP1L1Q8IWN7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.81■□□□□ 0.92
RP1L1Q8IWN7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RP1L1Q8IWN7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RP1L1Q8IWN7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RP1L1Q8IWN7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RP1L1Q8IWN7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.8■□□□□ 0.92
RP1L1Q8IWN7 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RP1L1Q8IWN7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RP1L1Q8IWN7 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RP1L1Q8IWN7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RP1L1Q8IWN7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RP1L1Q8IWN7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.79■□□□□ 0.92
RP1L1Q8IWN7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RP1L1Q8IWN7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RP1L1Q8IWN7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.79■□□□□ 0.92
RP1L1Q8IWN7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RP1L1Q8IWN7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RP1L1Q8IWN7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RP1L1Q8IWN7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RP1L1Q8IWN7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.78■□□□□ 0.92
RP1L1Q8IWN7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RP1L1Q8IWN7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.78■□□□□ 0.92
RP1L1Q8IWN7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.78■□□□□ 0.92
RP1L1Q8IWN7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RP1L1Q8IWN7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RP1L1Q8IWN7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RP1L1Q8IWN7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.78■□□□□ 0.92
RP1L1Q8IWN7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.78■□□□□ 0.92
RP1L1Q8IWN7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.77■□□□□ 0.92
RP1L1Q8IWN7 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.77■□□□□ 0.92
RP1L1Q8IWN7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RP1L1Q8IWN7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
RP1L1Q8IWN7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RP1L1Q8IWN7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RP1L1Q8IWN7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.77■□□□□ 0.91
RP1L1Q8IWN7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RP1L1Q8IWN7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.77■□□□□ 0.91
RP1L1Q8IWN7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RP1L1Q8IWN7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RP1L1Q8IWN7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RP1L1Q8IWN7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RP1L1Q8IWN7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RP1L1Q8IWN7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RP1L1Q8IWN7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RP1L1Q8IWN7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RP1L1Q8IWN7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RP1L1Q8IWN7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
RP1L1Q8IWN7 AC009102.2-201ENST00000606772 1639 ntBASIC20.76■□□□□ 0.91
RP1L1Q8IWN7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.76■□□□□ 0.91
RP1L1Q8IWN7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RP1L1Q8IWN7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.75■□□□□ 0.91
RP1L1Q8IWN7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.75■□□□□ 0.91
RP1L1Q8IWN7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.75■□□□□ 0.91
RP1L1Q8IWN7 AC004448.1-201ENST00000458332 883 ntBASIC20.75■□□□□ 0.91
RP1L1Q8IWN7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RP1L1Q8IWN7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RP1L1Q8IWN7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RP1L1Q8IWN7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.75■□□□□ 0.91
RP1L1Q8IWN7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RP1L1Q8IWN7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RP1L1Q8IWN7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RP1L1Q8IWN7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RP1L1Q8IWN7 C17orf82-201ENST00000623772 1530 ntBASIC20.74■□□□□ 0.91
RP1L1Q8IWN7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RP1L1Q8IWN7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RP1L1Q8IWN7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RP1L1Q8IWN7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RP1L1Q8IWN7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
RP1L1Q8IWN7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.73■□□□□ 0.91
RP1L1Q8IWN7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RP1L1Q8IWN7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RP1L1Q8IWN7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RP1L1Q8IWN7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RP1L1Q8IWN7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RP1L1Q8IWN7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RP1L1Q8IWN7 AC092437.1-201ENST00000624794 1048 ntBASIC20.73■□□□□ 0.91
RP1L1Q8IWN7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RP1L1Q8IWN7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RP1L1Q8IWN7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RP1L1Q8IWN7 AC233992.3-201ENST00000607491 485 ntBASIC20.72■□□□□ 0.91
RP1L1Q8IWN7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RP1L1Q8IWN7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.72■□□□□ 0.91
RP1L1Q8IWN7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RP1L1Q8IWN7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RP1L1Q8IWN7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RP1L1Q8IWN7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms