Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF546Q86UE3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF546Q86UE3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
ZNF546Q86UE3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
ZNF546Q86UE3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF546Q86UE3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF546Q86UE3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.06■□□□□ 0.64
ZNF546Q86UE3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF546Q86UE3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF546Q86UE3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
ZNF546Q86UE3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF546Q86UE3 AL137060.1-201ENST00000618151 2648 ntBASIC19.05■□□□□ 0.64
ZNF546Q86UE3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF546Q86UE3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF546Q86UE3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF546Q86UE3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
ZNF546Q86UE3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF546Q86UE3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF546Q86UE3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF546Q86UE3 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
ZNF546Q86UE3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF546Q86UE3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF546Q86UE3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF546Q86UE3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
ZNF546Q86UE3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF546Q86UE3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF546Q86UE3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF546Q86UE3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF546Q86UE3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF546Q86UE3 AC087741.3-201ENST00000624270 1347 ntBASIC19.04■□□□□ 0.64
ZNF546Q86UE3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.04■□□□□ 0.64
ZNF546Q86UE3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.04■□□□□ 0.64
ZNF546Q86UE3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF546Q86UE3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF546Q86UE3 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.04■□□□□ 0.64
ZNF546Q86UE3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF546Q86UE3 AC044849.2-201ENST00000606596 710 ntBASIC19.04■□□□□ 0.64
ZNF546Q86UE3 MIR6089-201ENST00000616698 64 ntBASIC19.04■□□□□ 0.64
ZNF546Q86UE3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
ZNF546Q86UE3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF546Q86UE3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
ZNF546Q86UE3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.04■□□□□ 0.64
ZNF546Q86UE3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF546Q86UE3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF546Q86UE3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF546Q86UE3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF546Q86UE3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF546Q86UE3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF546Q86UE3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ZNF546Q86UE3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
ZNF546Q86UE3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZNF546Q86UE3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
ZNF546Q86UE3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZNF546Q86UE3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
ZNF546Q86UE3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
ZNF546Q86UE3 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
ZNF546Q86UE3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.02■□□□□ 0.63
ZNF546Q86UE3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.01■□□□□ 0.63
ZNF546Q86UE3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF546Q86UE3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF546Q86UE3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF546Q86UE3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF546Q86UE3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF546Q86UE3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.01■□□□□ 0.63
ZNF546Q86UE3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
ZNF546Q86UE3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.01■□□□□ 0.63
ZNF546Q86UE3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.01■□□□□ 0.63
ZNF546Q86UE3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.01■□□□□ 0.63
ZNF546Q86UE3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF546Q86UE3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF546Q86UE3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF546Q86UE3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19■□□□□ 0.63
ZNF546Q86UE3 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF546Q86UE3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
ZNF546Q86UE3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF546Q86UE3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF546Q86UE3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF546Q86UE3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF546Q86UE3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF546Q86UE3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF546Q86UE3 DUSP8P3-201ENST00000399571 1760 ntBASIC19■□□□□ 0.63
ZNF546Q86UE3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF546Q86UE3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZNF546Q86UE3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
ZNF546Q86UE3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF546Q86UE3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
ZNF546Q86UE3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZNF546Q86UE3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZNF546Q86UE3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
ZNF546Q86UE3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
ZNF546Q86UE3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
ZNF546Q86UE3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF546Q86UE3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC18.99■□□□□ 0.63
ZNF546Q86UE3 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.99■□□□□ 0.63
ZNF546Q86UE3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF546Q86UE3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
ZNF546Q86UE3 HLA-L-211ENST00000482052 1765 ntBASIC18.98■□□□□ 0.63
ZNF546Q86UE3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
ZNF546Q86UE3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF546Q86UE3 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms