Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
DDX53Q86TM3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
DDX53Q86TM3 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
DDX53Q86TM3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
DDX53Q86TM3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC24.58■■□□□ 1.53
DDX53Q86TM3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.52
DDX53Q86TM3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
DDX53Q86TM3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
DDX53Q86TM3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.57■■□□□ 1.52
DDX53Q86TM3 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
DDX53Q86TM3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC24.57■■□□□ 1.52
DDX53Q86TM3 AC026271.2-201ENST00000428091 497 ntBASIC24.57■■□□□ 1.52
DDX53Q86TM3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC24.57■■□□□ 1.52
DDX53Q86TM3 AF213884.3-201ENST00000563833 479 ntBASIC24.57■■□□□ 1.52
DDX53Q86TM3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC24.57■■□□□ 1.52
DDX53Q86TM3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24.57■■□□□ 1.52
DDX53Q86TM3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC24.57■■□□□ 1.52
DDX53Q86TM3 SYT6-210ENST00000641643 1587 ntBASIC24.57■■□□□ 1.52
DDX53Q86TM3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.52
DDX53Q86TM3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
DDX53Q86TM3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC24.56■■□□□ 1.52
DDX53Q86TM3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
DDX53Q86TM3 MIR939-201ENST00000401314 82 ntBASIC24.56■■□□□ 1.52
DDX53Q86TM3 MIR6089-201ENST00000616698 64 ntBASIC24.56■■□□□ 1.52
DDX53Q86TM3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
DDX53Q86TM3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
DDX53Q86TM3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
DDX53Q86TM3 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
DDX53Q86TM3 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
DDX53Q86TM3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC24.55■■□□□ 1.52
DDX53Q86TM3 AC105265.2-201ENST00000467189 838 ntBASIC24.55■■□□□ 1.52
DDX53Q86TM3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
DDX53Q86TM3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.55■■□□□ 1.52
DDX53Q86TM3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
DDX53Q86TM3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.55■■□□□ 1.52
DDX53Q86TM3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC24.54■■□□□ 1.52
DDX53Q86TM3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
DDX53Q86TM3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
DDX53Q86TM3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
DDX53Q86TM3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
DDX53Q86TM3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
DDX53Q86TM3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.54■■□□□ 1.52
DDX53Q86TM3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC24.53■■□□□ 1.52
DDX53Q86TM3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
DDX53Q86TM3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
DDX53Q86TM3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
DDX53Q86TM3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
DDX53Q86TM3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
DDX53Q86TM3 AP001330.3-201ENST00000520123 633 ntBASIC24.53■■□□□ 1.52
DDX53Q86TM3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
DDX53Q86TM3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC24.53■■□□□ 1.52
DDX53Q86TM3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
DDX53Q86TM3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.53■■□□□ 1.52
DDX53Q86TM3 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
DDX53Q86TM3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.52■■□□□ 1.52
DDX53Q86TM3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
DDX53Q86TM3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
DDX53Q86TM3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC24.52■■□□□ 1.52
DDX53Q86TM3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
DDX53Q86TM3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
DDX53Q86TM3 AL022069.1-201ENST00000568025 1636 ntBASIC24.52■■□□□ 1.52
DDX53Q86TM3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC24.52■■□□□ 1.52
DDX53Q86TM3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.51■■□□□ 1.51
DDX53Q86TM3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.51■■□□□ 1.51
DDX53Q86TM3 MIR4767-201ENST00000582827 78 ntBASIC24.51■■□□□ 1.51
DDX53Q86TM3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
DDX53Q86TM3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
DDX53Q86TM3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.51■■□□□ 1.51
DDX53Q86TM3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.5■■□□□ 1.51
DDX53Q86TM3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
DDX53Q86TM3 SERBP1P1-201ENST00000396021 1160 ntBASIC24.5■■□□□ 1.51
DDX53Q86TM3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC24.5■■□□□ 1.51
DDX53Q86TM3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
DDX53Q86TM3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.5■■□□□ 1.51
DDX53Q86TM3 AC099791.2-201ENST00000605725 427 ntBASIC24.5■■□□□ 1.51
DDX53Q86TM3 DUSP8P4-201ENST00000399538 1761 ntBASIC24.49■■□□□ 1.51
DDX53Q86TM3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.49■■□□□ 1.51
DDX53Q86TM3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
DDX53Q86TM3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.49■■□□□ 1.51
DDX53Q86TM3 AC091305.1-201ENST00000479476 895 ntBASIC24.49■■□□□ 1.51
DDX53Q86TM3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC24.49■■□□□ 1.51
DDX53Q86TM3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
DDX53Q86TM3 AC009102.2-201ENST00000606772 1639 ntBASIC24.49■■□□□ 1.51
DDX53Q86TM3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
DDX53Q86TM3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
DDX53Q86TM3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
DDX53Q86TM3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
DDX53Q86TM3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
DDX53Q86TM3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.47■■□□□ 1.51
DDX53Q86TM3 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.47■■□□□ 1.51
DDX53Q86TM3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
DDX53Q86TM3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
DDX53Q86TM3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.47■■□□□ 1.51
DDX53Q86TM3 AL138724.1-201ENST00000606771 1088 ntBASIC24.47■■□□□ 1.51
DDX53Q86TM3 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
DDX53Q86TM3 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
DDX53Q86TM3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
DDX53Q86TM3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
DDX53Q86TM3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.46■■□□□ 1.51
DDX53Q86TM3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms