Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 AP004609.3-201ENST00000610705 1884 ntBASIC19.7■□□□□ 0.74
CSMD2Q7Z408 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSMD2Q7Z408 C17orf82-201ENST00000623772 1530 ntBASIC19.7■□□□□ 0.74
CSMD2Q7Z408 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.7■□□□□ 0.74
CSMD2Q7Z408 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CSMD2Q7Z408 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CSMD2Q7Z408 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSMD2Q7Z408 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.69■□□□□ 0.74
CSMD2Q7Z408 AL138724.1-201ENST00000606771 1088 ntBASIC19.69■□□□□ 0.74
CSMD2Q7Z408 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSMD2Q7Z408 AC090877.2-201ENST00000558441 1738 ntBASIC19.69■□□□□ 0.74
CSMD2Q7Z408 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSMD2Q7Z408 AC123595.1-201ENST00000440769 1046 ntBASIC19.69■□□□□ 0.74
CSMD2Q7Z408 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CSMD2Q7Z408 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
CSMD2Q7Z408 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
CSMD2Q7Z408 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSMD2Q7Z408 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CSMD2Q7Z408 AC099791.2-201ENST00000605725 427 ntBASIC19.68■□□□□ 0.74
CSMD2Q7Z408 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.68■□□□□ 0.74
CSMD2Q7Z408 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.68■□□□□ 0.74
CSMD2Q7Z408 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.68■□□□□ 0.74
CSMD2Q7Z408 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.68■□□□□ 0.74
CSMD2Q7Z408 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSMD2Q7Z408 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.68■□□□□ 0.74
CSMD2Q7Z408 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.68■□□□□ 0.74
CSMD2Q7Z408 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSMD2Q7Z408 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CSMD2Q7Z408 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.67■□□□□ 0.74
CSMD2Q7Z408 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.67■□□□□ 0.74
CSMD2Q7Z408 AC104771.1-201ENST00000603335 964 ntBASIC19.67■□□□□ 0.74
CSMD2Q7Z408 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSMD2Q7Z408 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.67■□□□□ 0.74
CSMD2Q7Z408 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CSMD2Q7Z408 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSMD2Q7Z408 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CSMD2Q7Z408 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CSMD2Q7Z408 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.67■□□□□ 0.74
CSMD2Q7Z408 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CSMD2Q7Z408 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CSMD2Q7Z408 TERF1P2-201ENST00000583350 1212 ntBASIC19.67■□□□□ 0.74
CSMD2Q7Z408 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.66■□□□□ 0.74
CSMD2Q7Z408 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSMD2Q7Z408 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.66■□□□□ 0.74
CSMD2Q7Z408 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSMD2Q7Z408 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.66■□□□□ 0.74
CSMD2Q7Z408 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSMD2Q7Z408 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSMD2Q7Z408 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CSMD2Q7Z408 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CSMD2Q7Z408 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSMD2Q7Z408 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSMD2Q7Z408 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSMD2Q7Z408 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
CSMD2Q7Z408 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSMD2Q7Z408 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSMD2Q7Z408 TSPY26P-201ENST00000476365 1326 ntBASIC19.65■□□□□ 0.74
CSMD2Q7Z408 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CSMD2Q7Z408 CDCA4P2-201ENST00000441182 718 ntBASIC19.64■□□□□ 0.74
CSMD2Q7Z408 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
CSMD2Q7Z408 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSMD2Q7Z408 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.64■□□□□ 0.73
CSMD2Q7Z408 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSMD2Q7Z408 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CSMD2Q7Z408 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.64■□□□□ 0.73
CSMD2Q7Z408 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSMD2Q7Z408 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.64■□□□□ 0.73
CSMD2Q7Z408 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CSMD2Q7Z408 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CSMD2Q7Z408 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.63■□□□□ 0.73
CSMD2Q7Z408 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSMD2Q7Z408 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSMD2Q7Z408 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.63■□□□□ 0.73
CSMD2Q7Z408 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSMD2Q7Z408 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CSMD2Q7Z408 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSMD2Q7Z408 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.63■□□□□ 0.73
CSMD2Q7Z408 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CSMD2Q7Z408 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.63■□□□□ 0.73
CSMD2Q7Z408 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.63■□□□□ 0.73
CSMD2Q7Z408 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSMD2Q7Z408 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.63■□□□□ 0.73
CSMD2Q7Z408 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSMD2Q7Z408 AC009102.2-201ENST00000606772 1639 ntBASIC19.62■□□□□ 0.73
CSMD2Q7Z408 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CSMD2Q7Z408 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CSMD2Q7Z408 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CSMD2Q7Z408 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSMD2Q7Z408 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.62■□□□□ 0.73
CSMD2Q7Z408 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CSMD2Q7Z408 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.62■□□□□ 0.73
CSMD2Q7Z408 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.62■□□□□ 0.73
CSMD2Q7Z408 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.62■□□□□ 0.73
CSMD2Q7Z408 ST7-205ENST00000393446 2114 ntTSL 5 BASIC19.62■□□□□ 0.73
CSMD2Q7Z408 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CSMD2Q7Z408 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CSMD2Q7Z408 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSMD2Q7Z408 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.62■□□□□ 0.73
CSMD2Q7Z408 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CSMD2Q7Z408 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms