Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
RFWD3Q6PCD5 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.95■■□□□ 1.42
RFWD3Q6PCD5 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RFWD3Q6PCD5 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RFWD3Q6PCD5 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
RFWD3Q6PCD5 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.95■■□□□ 1.42
RFWD3Q6PCD5 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
RFWD3Q6PCD5 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RFWD3Q6PCD5 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.95■■□□□ 1.42
RFWD3Q6PCD5 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RFWD3Q6PCD5 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RFWD3Q6PCD5 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RFWD3Q6PCD5 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
RFWD3Q6PCD5 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.94■■□□□ 1.42
RFWD3Q6PCD5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RFWD3Q6PCD5 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.94■■□□□ 1.42
RFWD3Q6PCD5 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.94■■□□□ 1.42
RFWD3Q6PCD5 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.94■■□□□ 1.42
RFWD3Q6PCD5 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RFWD3Q6PCD5 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RFWD3Q6PCD5 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RFWD3Q6PCD5 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.93■■□□□ 1.42
RFWD3Q6PCD5 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RFWD3Q6PCD5 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RFWD3Q6PCD5 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RFWD3Q6PCD5 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.93■■□□□ 1.42
RFWD3Q6PCD5 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.92■■□□□ 1.42
RFWD3Q6PCD5 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RFWD3Q6PCD5 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
RFWD3Q6PCD5 AC010997.5-201ENST00000609182 354 ntBASIC23.92■■□□□ 1.42
RFWD3Q6PCD5 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.92■■□□□ 1.42
RFWD3Q6PCD5 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
RFWD3Q6PCD5 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RFWD3Q6PCD5 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.92■■□□□ 1.42
RFWD3Q6PCD5 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RFWD3Q6PCD5 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RFWD3Q6PCD5 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.91■■□□□ 1.42
RFWD3Q6PCD5 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.91■■□□□ 1.42
RFWD3Q6PCD5 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RFWD3Q6PCD5 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.91■■□□□ 1.42
RFWD3Q6PCD5 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RFWD3Q6PCD5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.91■■□□□ 1.42
RFWD3Q6PCD5 MTDHP2-201ENST00000601468 714 ntBASIC23.91■■□□□ 1.42
RFWD3Q6PCD5 SNX5-217ENST00000606557 1087 ntBASIC23.91■■□□□ 1.42
RFWD3Q6PCD5 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.91■■□□□ 1.42
RFWD3Q6PCD5 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RFWD3Q6PCD5 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RFWD3Q6PCD5 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
RFWD3Q6PCD5 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RFWD3Q6PCD5 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
RFWD3Q6PCD5 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RFWD3Q6PCD5 AC133561.1-201ENST00000568600 2415 ntBASIC23.9■■□□□ 1.42
RFWD3Q6PCD5 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RFWD3Q6PCD5 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.9■■□□□ 1.42
RFWD3Q6PCD5 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RFWD3Q6PCD5 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
RFWD3Q6PCD5 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.89■■□□□ 1.42
RFWD3Q6PCD5 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
RFWD3Q6PCD5 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
RFWD3Q6PCD5 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
RFWD3Q6PCD5 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.89■■□□□ 1.42
RFWD3Q6PCD5 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RFWD3Q6PCD5 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
RFWD3Q6PCD5 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
RFWD3Q6PCD5 AC138932.3-201ENST00000567634 1902 ntBASIC23.88■■□□□ 1.41
RFWD3Q6PCD5 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RFWD3Q6PCD5 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.88■■□□□ 1.41
RFWD3Q6PCD5 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RFWD3Q6PCD5 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.88■■□□□ 1.41
RFWD3Q6PCD5 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.88■■□□□ 1.41
RFWD3Q6PCD5 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.88■■□□□ 1.41
RFWD3Q6PCD5 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RFWD3Q6PCD5 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.88■■□□□ 1.41
RFWD3Q6PCD5 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.88■■□□□ 1.41
RFWD3Q6PCD5 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.87■■□□□ 1.41
RFWD3Q6PCD5 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RFWD3Q6PCD5 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RFWD3Q6PCD5 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
RFWD3Q6PCD5 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RFWD3Q6PCD5 HLA-L-211ENST00000482052 1765 ntBASIC23.87■■□□□ 1.41
RFWD3Q6PCD5 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RFWD3Q6PCD5 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.86■■□□□ 1.41
RFWD3Q6PCD5 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.86■■□□□ 1.41
RFWD3Q6PCD5 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RFWD3Q6PCD5 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
RFWD3Q6PCD5 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RFWD3Q6PCD5 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RFWD3Q6PCD5 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
RFWD3Q6PCD5 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.85■■□□□ 1.41
RFWD3Q6PCD5 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.85■■□□□ 1.41
RFWD3Q6PCD5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.85■■□□□ 1.41
RFWD3Q6PCD5 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.85■■□□□ 1.41
RFWD3Q6PCD5 AC131274.2-201ENST00000580697 1507 ntBASIC23.84■■□□□ 1.41
RFWD3Q6PCD5 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RFWD3Q6PCD5 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.84■■□□□ 1.41
RFWD3Q6PCD5 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RFWD3Q6PCD5 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
RFWD3Q6PCD5 AC142381.3-201ENST00000568208 1670 ntBASIC23.84■■□□□ 1.41
RFWD3Q6PCD5 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.84■■□□□ 1.41
RFWD3Q6PCD5 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms