Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 DUX4L18-201ENST00000553347 1267 ntBASIC20.79■□□□□ 0.92
TMEM53Q6P2H8 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.79■□□□□ 0.92
TMEM53Q6P2H8 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
TMEM53Q6P2H8 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
TMEM53Q6P2H8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.79■□□□□ 0.92
TMEM53Q6P2H8 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMEM53Q6P2H8 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMEM53Q6P2H8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.79■□□□□ 0.92
TMEM53Q6P2H8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TMEM53Q6P2H8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMEM53Q6P2H8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMEM53Q6P2H8 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
TMEM53Q6P2H8 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM53Q6P2H8 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.78■□□□□ 0.92
TMEM53Q6P2H8 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TMEM53Q6P2H8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM53Q6P2H8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM53Q6P2H8 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TMEM53Q6P2H8 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM53Q6P2H8 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM53Q6P2H8 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM53Q6P2H8 AC004987.1-201ENST00000428627 508 ntBASIC20.78■□□□□ 0.92
TMEM53Q6P2H8 AC139795.1-202ENST00000500444 432 ntBASIC20.78■□□□□ 0.92
TMEM53Q6P2H8 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM53Q6P2H8 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
TMEM53Q6P2H8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM53Q6P2H8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM53Q6P2H8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM53Q6P2H8 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.78■□□□□ 0.92
TMEM53Q6P2H8 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM53Q6P2H8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM53Q6P2H8 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM53Q6P2H8 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.77■□□□□ 0.92
TMEM53Q6P2H8 TSPY13P-201ENST00000338964 914 ntBASIC20.77■□□□□ 0.92
TMEM53Q6P2H8 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM53Q6P2H8 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.77■□□□□ 0.92
TMEM53Q6P2H8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
TMEM53Q6P2H8 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
TMEM53Q6P2H8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM53Q6P2H8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TMEM53Q6P2H8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TMEM53Q6P2H8 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TMEM53Q6P2H8 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
TMEM53Q6P2H8 AL117328.2-201ENST00000624617 1940 ntBASIC20.76■□□□□ 0.91
TMEM53Q6P2H8 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM53Q6P2H8 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM53Q6P2H8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM53Q6P2H8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM53Q6P2H8 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM53Q6P2H8 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
TMEM53Q6P2H8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.76■□□□□ 0.91
TMEM53Q6P2H8 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM53Q6P2H8 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.76■□□□□ 0.91
TMEM53Q6P2H8 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM53Q6P2H8 AC087393.1-201ENST00000582896 145 ntBASIC20.76■□□□□ 0.91
TMEM53Q6P2H8 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM53Q6P2H8 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.76■□□□□ 0.91
TMEM53Q6P2H8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
TMEM53Q6P2H8 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.76■□□□□ 0.91
TMEM53Q6P2H8 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM53Q6P2H8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM53Q6P2H8 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM53Q6P2H8 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.75■□□□□ 0.91
TMEM53Q6P2H8 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TMEM53Q6P2H8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM53Q6P2H8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.75■□□□□ 0.91
TMEM53Q6P2H8 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.75■□□□□ 0.91
TMEM53Q6P2H8 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM53Q6P2H8 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TMEM53Q6P2H8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM53Q6P2H8 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM53Q6P2H8 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM53Q6P2H8 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM53Q6P2H8 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM53Q6P2H8 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM53Q6P2H8 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM53Q6P2H8 AC142381.3-201ENST00000568208 1670 ntBASIC20.74■□□□□ 0.91
TMEM53Q6P2H8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM53Q6P2H8 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM53Q6P2H8 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM53Q6P2H8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM53Q6P2H8 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.74■□□□□ 0.91
TMEM53Q6P2H8 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
TMEM53Q6P2H8 BHLHE23-202ENST00000612929 1109 ntBASIC20.74■□□□□ 0.91
TMEM53Q6P2H8 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM53Q6P2H8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.74■□□□□ 0.91
TMEM53Q6P2H8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
TMEM53Q6P2H8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM53Q6P2H8 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM53Q6P2H8 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.73■□□□□ 0.91
TMEM53Q6P2H8 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM53Q6P2H8 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TMEM53Q6P2H8 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM53Q6P2H8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM53Q6P2H8 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM53Q6P2H8 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM53Q6P2H8 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM53Q6P2H8 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TMEM53Q6P2H8 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TMEM53Q6P2H8 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms